| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24146 | 3:902,277-905,502 | + | C1H3g21463 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C2H3g12012 | 3:905,885-908,766 | - | C1H3g16632 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C2H3g14284 | 3:910,317-914,198 | - | C1H3g08934 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| C2H3g02407 | 3:923,819-927,470 | - | C1H3g03441 | CX3g026290 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| C2H3g11600 | 3:929,349-930,854 | - | C1H3g10934 | CX3g025360 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| C2H3g16408 | 3:944,013-947,894 | + | C1H3g08539 | CX3g028149 | LOC_Os03g02890 | Os03g0120800 | - | Detail |
| C2H3g18948 | 3:960,186-961,118 | + | C1H3g19352 | CX3g029289 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| C2H3g18738 | 3:978,379-982,304 | - | C1H3g28264 | CX3g025034 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| C2H3g23557 | 3:984,957-986,513 | - | C1H3g20047 | CX3g026688 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| C2H3g04065 | 3:993,230-994,504 | + | C1H3g01141 | CX3g025202 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| C2H3g16968 | 3:994,604-1,003,811 | - | C1H3g02111 | CX3g027774 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| C2H3g23905 | 3:1,015,206-1,021,163 | + | C1H3g23785 | CX3g028931 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| C2H3g27024 | 3:1,028,901-1,029,277 | + | C1H3g05090 | - | - | - | - | Detail |
| C2H3g24994 | 3:1,029,464-1,032,408 | + | C1H3g07706 | CX3g026004 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| C2H3g11967 | 3:1,035,229-1,037,122 | - | C1H3g24387 | CX3g025069 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| C2H3g05774 | 3:1,038,204-1,043,973 | - | C1H3g05611 | CX3g031243 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| C2H3g15040 | 3:1,057,763-1,062,339 | - | C1H3g26838 | CX3g027036 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| C2H3g28462 | 3:1,082,037-1,083,831 | - | C1H3g04456 | CX3g025481 | LOC_Os03g03100 | Os03g0834466 | - | Detail |
| C2H3g16267 | 3:1,095,728-1,096,384 | + | C1H3g18665 | CX3g031045 | - | - | - | Detail |
| C2H3g19854 | 3:1,097,016-1,100,081 | + | C1H3g16789 | CX3g030103 | LOC_Os03g03130 | Os03g0123100 | OsSCE2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006528 | 1:12,533,611-12,535,227 | + | C1H1g22060 | C2H1g13094 | LOC_Os01g24690 | Os01g0348700 | - | Detail |
| CX1g005263 | 1:12,536,615-12,536,764 | + | - | - | - | - | - | Detail |
| CX1g002294 | 1:12,541,317-12,541,851 | - | C1H1g00208 | C2H1g30396 | LOC_Os01g24710 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| CX1g000624 | 1:12,550,498-12,551,196 | + | - | - | - | - | - | Detail |
| CX1g004857 | 1:12,560,163-12,563,695 | - | C1H1g16274 | C2H1g24096 | LOC_Os01g24750 | Os01g0349400 | - | Detail |
| CX1g002976 | 1:12,570,852-12,571,070 | + | - | - | LOC_Os01g24764 | Os01g0349600 | - | Detail |
| CX1g000662 | 1:12,577,345-12,580,488 | + | C1H1g27046 | C2H1g13316 | LOC_Os01g24780 | Os01g0349800 | - | Detail |
| CX1g006722 | 1:12,603,798-12,606,254 | + | - | - | LOC_Os01g27900 | - | - | Detail |
| CX1g001324 | 1:12,657,013-12,658,347 | + | C1H1g13467 | C2H1g09893 | LOC_Os01g24790 | Os01g0350000 | - | Detail |
| CX1g006186 | 1:12,673,186-12,674,649 | + | C1H1g25990 | C2H1g07279 | LOC_Os01g24810 | Os01g0957600 | - | Detail |
| CX1g006522 | 1:12,690,517-12,690,675 | + | - | - | - | - | - | Detail |
| CX1g005379 | 1:12,708,890-12,709,078 | + | - | - | - | - | - | Detail |
| CX1g002097 | 1:12,717,460-12,717,768 | - | - | - | - | - | - | Detail |
| CX1g004681 | 1:12,728,173-12,728,632 | + | - | C2H6g13770 | - | Os07g0431160 | - | Detail |
| CX1g005313 | 1:12,729,117-12,729,290 | + | - | - | - | Os12g0261250 | - | Detail |
| CX1g006094 | 1:12,736,530-12,736,748 | - | - | - | - | - | - | Detail |
| CX1g000405 | 1:12,738,536-12,739,061 | + | - | - | - | - | - | Detail |
| CX1g001694 | 1:12,741,420-12,745,402 | - | C1H1g11336 | C2H1g08931 | LOC_Os01g24820 | Os01g0350300 | - | Detail |
| CX1g002539 | 1:12,746,611-12,747,030 | - | - | - | - | - | - | Detail |
| CX1g001122 | 1:12,748,168-12,748,557 | - | - | - | LOC_Os01g24840 | Os01g0350500 | - | Detail |