| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g15259 | 9:13,434,841-13,435,822 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g03422 | 9:13,437,865-13,441,018 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g09724 | 9:13,446,277-13,447,467 | + | C1H9g05369 | CX9g057698 | LOC_Os09g26480 | - | - | Detail |
| C2H9g14632 | 9:13,456,830-13,458,152 | + | C1H9g19041 | CX9g054961 | LOC_Os09g26500 | Os09g0435700 | - | Detail |
| C2H9g30633 | 9:13,459,794-13,462,499 | - | C1H9g08312 | CX9g057172 | LOC_Os09g26560 | Os09g0436700 | - | Detail |
| C2H9g21233 | 9:13,465,283-13,476,610 | + | C1H9g26425 | CX9g056280 | LOC_Os09g26570 | Os09g0436800 | - | Detail |
| C2H9g00492 | 9:13,477,413-13,480,745 | + | C1H9g23177 | CX9g057291 | LOC_Os09g26580 | Os09g0436900 | - | Detail |
| C2H9g23573 | 9:13,522,063-13,523,941 | + | C1H9g21686 | CX9g057952 | LOC_Os09g26620 | Os09g0437500 | - | Detail |
| C2H9g14978 | 9:13,536,716-13,541,741 | + | C1H9g24554 | CX9g055490 | LOC_Os09g26650 | Os09g0437900 | - | Detail |
| C2H9g27047 | 9:13,553,018-13,564,034 | + | C1H9g08513 | CX9g054927 | LOC_Os09g26660 | Os09g0438000 | - | Detail |
| C2H9g20994 | 9:13,576,305-13,580,039 | + | C1H9g20112 | CX9g057379 | LOC_Os09g26700 | Os09g0438400 | - | Detail |
| C2H9g14306 | 9:13,584,816-13,588,809 | - | C1H9g28577 | CX9g055603 | LOC_Os09g26730 | Os09g0438700 | - | Detail |
| C2H9g11312 | 9:13,589,802-13,595,397 | - | C1H9g16805 | CX9g056328 | LOC_Os09g26760 | Os09g0439000 | - | Detail |
| C2H9g23826 | 9:13,601,591-13,602,833 | - | C1H9g29651 | CX9g056370 | LOC_Os09g26780 | Os09g0439200 | TIFY10C, OsJAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8 | Detail |
| C2H9g11140 | 9:13,611,056-13,615,575 | + | C1H9g23984 | CX9g055995 | LOC_Os09g26800 | Os09g0439400 | - | Detail |
| C2H9g08335 | 9:13,616,371-13,619,064 | + | C1H9g04697 | CX9g055543 | LOC_Os09g26810 | Os09g0439500 | - | Detail |
| C2H9g01871 | 9:13,629,522-13,633,996 | - | C1H9g08389 | CX9g057070 | LOC_Os09g26830 | Os09g0439700 | - | Detail |
| C2H9g05545 | 9:13,636,587-13,639,099 | - | C1H9g03005 | CX9g056810 | LOC_Os09g26840 | Os09g0439800 | DRO1, Dro1 | Detail |
| C2H9g26904 | 9:13,651,920-13,656,034 | + | C1H9g31362 | CX9g057829 | LOC_Os09g26870 | Os09g0440200 | - | Detail |
| C2H9g23477 | 9:13,656,062-13,663,114 | - | C1H9g12516 | CX9g057254 | LOC_Os09g26880 | Os09g0440300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022396 | 2:31,275,190-31,276,249 | - | - | - | - | Os02g0803225 | - | Detail |
| CX2g020265 | 2:31,287,265-31,290,689 | + | C1H2g28140 | C2H2g09719 | LOC_Os02g55970 | Os02g0803300 | - | Detail |
| CX2g018868 | 2:31,291,483-31,292,372 | - | C1H2g29422 | C2H2g22479 | LOC_Os02g55980 | Os02g0803400 | - | Detail |
| CX2g022206 | 2:31,294,455-31,295,979 | + | C1H2g14622 | C2H2g05755 | LOC_Os02g55990 | Os02g0803600 | - | Detail |
| CX2g021842 | 2:31,296,611-31,300,223 | - | C1H2g12587 | C2H2g01956 | LOC_Os02g56000 | Os02g0803700 | - | Detail |
| CX2g021756 | 2:31,303,631-31,304,968 | + | C1H2g17458 | C2H2g25126 | LOC_Os02g56010 | Os02g0803900 | - | Detail |
| CX2g024534 | 2:31,314,259-31,314,570 | - | - | - | - | - | - | Detail |
| CX2g021501 | 2:31,322,687-31,322,985 | - | C1H6g22975 | C2H2g27448 | LOC_Os02g56014 | Os02g0804100 | - | Detail |
| CX2g023214 | 2:31,323,217-31,326,642 | + | C1H2g20947 | C2H2g02958 | LOC_Os02g56020 | Os02g0804300 | - | Detail |
| CX2g019813 | 2:31,327,097-31,327,827 | + | C1H2g11666 | C2H2g06460 | LOC_Os02g56030 | Os02g0804400 | - | Detail |
| CX2g020092 | 2:31,328,572-31,335,268 | - | C1H2g07400 | C2H2g06255 | LOC_Os02g56040 | Os02g0804500 | OsDjA2 | Detail |
| CX2g021763 | 2:31,337,116-31,340,562 | - | C1H2g26632 | C2H2g30585 | LOC_Os02g56050 | Os02g0804600 | - | Detail |
| CX2g021393 | 2:31,345,202-31,349,583 | + | C1H2g22356 | C2H2g25841 | LOC_Os02g56100 | Os02g0804900 | RNRL2 | Detail |
| CX2g021776 | 2:31,353,266-31,361,090 | - | C1H2g06681 | C2H2g24175 | LOC_Os02g56110 | Os02g0805000 | - | Detail |
| CX2g023851 | 2:31,366,803-31,367,805 | + | C1H2g26955 | C2H2g17406 | LOC_Os02g56120 | Os02g0805100 | - | Detail |
| CX2g022924 | 2:31,369,418-31,371,131 | + | C1H2g10518 | C2H2g05865 | LOC_Os02g56130 | Os02g0805200 | OsPCNA | Detail |
| CX2g024641 | 2:31,372,475-31,375,516 | - | C1H2g21301 | C2H2g03605 | LOC_Os02g56140 | Os02g0805250 | OsbHLH107 | Detail |
| CX2g021633 | 2:31,378,675-31,378,833 | + | - | - | - | - | - | Detail |
| CX2g022953 | 2:31,380,042-31,381,856 | - | C1H2g20898 | C2H2g06439 | LOC_Os02g56150 | Os02g0770300 | - | Detail |
| CX2g019287 | 2:31,382,585-31,382,734 | - | C1H4g20138 | - | - | - | - | Detail |