| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06044 | 5:8,732,534-8,738,092 | - | C2H5g03374 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C1H5g02530 | 5:8,760,037-8,760,783 | + | C2H5g20956 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C1H5g11498 | 5:8,792,083-8,797,263 | - | C2H5g25018 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C1H5g29704 | 5:8,828,494-8,835,493 | - | C2H5g28009 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C1H5g23736 | 5:8,893,494-8,899,217 | + | C2H5g12080 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C1H5g23078 | 5:8,917,761-8,927,257 | + | C2H5g08718 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C1H5g13096 | 5:8,934,229-8,937,379 | + | C2H5g23273 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C1H5g28156 | 5:8,974,209-8,975,740 | + | C2H5g23868 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C1H5g25005 | 5:8,980,073-8,981,614 | - | C2H5g01527 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C1H5g26284 | 5:9,051,646-9,054,481 | - | C2H5g28478 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C1H5g03157 | 5:9,120,269-9,120,637 | - | C2H5g02247 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C1H5g29214 | 5:9,133,203-9,134,894 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g05125 | 5:9,134,991-9,135,359 | - | C2H5g18533 | - | - | - | - | Detail |
| C1H5g08577 | 5:9,139,631-9,141,530 | - | C2H5g23953 | - | - | - | - | Detail |
| C1H5g05724 | 5:9,683,767-9,688,347 | + | C2H5g14404 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C1H5g04296 | 5:9,919,264-9,919,647 | + | C2H5g08960 | CX5g039313 | - | Os05g0289100 | - | Detail |
| C1H5g30033 | 5:9,921,175-9,923,640 | + | C2H3g30122 | CX6g041640 | - | Os04g0412350 | - | Detail |
| C1H5g26586 | 5:9,950,371-9,955,328 | - | C2H5g21346 | CX5g040894 | LOC_Os05g22260 | Os05g0289400 | - | Detail |
| C1H5g29959 | 5:9,956,464-9,956,942 | - | C2H5g29326 | CX5g040964 | LOC_Os05g22270 | - | - | Detail |
| C1H5g08048 | 5:9,965,097-9,966,597 | + | C2H5g03823 | CX5g040911 | LOC_Os05g22300 | Os05g0289700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022396 | 2:31,275,190-31,276,249 | - | - | - | - | Os02g0803225 | - | Detail |
| CX2g020265 | 2:31,287,265-31,290,689 | + | C1H2g28140 | C2H2g09719 | LOC_Os02g55970 | Os02g0803300 | - | Detail |
| CX2g018868 | 2:31,291,483-31,292,372 | - | C1H2g29422 | C2H2g22479 | LOC_Os02g55980 | Os02g0803400 | - | Detail |
| CX2g022206 | 2:31,294,455-31,295,979 | + | C1H2g14622 | C2H2g05755 | LOC_Os02g55990 | Os02g0803600 | - | Detail |
| CX2g021842 | 2:31,296,611-31,300,223 | - | C1H2g12587 | C2H2g01956 | LOC_Os02g56000 | Os02g0803700 | - | Detail |
| CX2g021756 | 2:31,303,631-31,304,968 | + | C1H2g17458 | C2H2g25126 | LOC_Os02g56010 | Os02g0803900 | - | Detail |
| CX2g024534 | 2:31,314,259-31,314,570 | - | - | - | - | - | - | Detail |
| CX2g021501 | 2:31,322,687-31,322,985 | - | C1H6g22975 | C2H2g27448 | LOC_Os02g56014 | Os02g0804100 | - | Detail |
| CX2g023214 | 2:31,323,217-31,326,642 | + | C1H2g20947 | C2H2g02958 | LOC_Os02g56020 | Os02g0804300 | - | Detail |
| CX2g019813 | 2:31,327,097-31,327,827 | + | C1H2g11666 | C2H2g06460 | LOC_Os02g56030 | Os02g0804400 | - | Detail |
| CX2g020092 | 2:31,328,572-31,335,268 | - | C1H2g07400 | C2H2g06255 | LOC_Os02g56040 | Os02g0804500 | OsDjA2 | Detail |
| CX2g021763 | 2:31,337,116-31,340,562 | - | C1H2g26632 | C2H2g30585 | LOC_Os02g56050 | Os02g0804600 | - | Detail |
| CX2g021393 | 2:31,345,202-31,349,583 | + | C1H2g22356 | C2H2g25841 | LOC_Os02g56100 | Os02g0804900 | RNRL2 | Detail |
| CX2g021776 | 2:31,353,266-31,361,090 | - | C1H2g06681 | C2H2g24175 | LOC_Os02g56110 | Os02g0805000 | - | Detail |
| CX2g023851 | 2:31,366,803-31,367,805 | + | C1H2g26955 | C2H2g17406 | LOC_Os02g56120 | Os02g0805100 | - | Detail |
| CX2g022924 | 2:31,369,418-31,371,131 | + | C1H2g10518 | C2H2g05865 | LOC_Os02g56130 | Os02g0805200 | OsPCNA | Detail |
| CX2g024641 | 2:31,372,475-31,375,516 | - | C1H2g21301 | C2H2g03605 | LOC_Os02g56140 | Os02g0805250 | OsbHLH107 | Detail |
| CX2g021633 | 2:31,378,675-31,378,833 | + | - | - | - | - | - | Detail |
| CX2g022953 | 2:31,380,042-31,381,856 | - | C1H2g20898 | C2H2g06439 | LOC_Os02g56150 | Os02g0770300 | - | Detail |
| CX2g019287 | 2:31,382,585-31,382,734 | - | C1H4g20138 | - | - | - | - | Detail |