| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g22656 | 3:7,805,508-7,809,963 | + | C1H3g07562 | CX3g024983 | LOC_Os03g16080 | Os03g0267700 | - | Detail |
| C2H3g06739 | 3:7,809,195-7,813,979 | - | C1H3g17372 | CX3g027806 | LOC_Os03g16090 | Os03g0267800 | HDR3 | Detail |
| C2H3g07700 | 3:7,823,472-7,827,013 | + | C1H3g04069 | CX3g026311 | LOC_Os03g16110 | Os03g0268000 | - | Detail |
| C2H3g30042 | 3:7,832,021-7,835,431 | - | C1H3g00060 | CX3g028752 | LOC_Os03g16120 | Os03g0268100 | - | Detail |
| C2H3g28116 | 3:7,838,285-7,843,948 | - | C1H3g17480 | CX3g026518 | LOC_Os03g16130 | Os03g0268200 | - | Detail |
| C2H3g23231 | 3:7,845,483-7,848,104 | - | C1H3g03581 | CX3g027084 | LOC_Os03g16140 | Os03g0268300 | - | Detail |
| C2H3g04060 | 3:7,851,684-7,855,092 | - | C1H3g26709 | CX3g026984 | LOC_Os03g16150 | Os03g0268400 | - | Detail |
| C2H3g09098 | 3:7,863,562-7,865,569 | - | C1H3g06011 | CX3g029114 | LOC_Os03g16170 | Os03g0268600 | - | Detail |
| C2H3g08488 | 3:7,873,345-7,875,616 | - | C1H3g02392 | CX3g025893 | LOC_Os03g16210 | Os03g0268900 | - | Detail |
| C2H3g11149 | 3:7,878,461-7,880,829 | - | C1H3g25433 | CX3g025893 | LOC_Os03g16220 | Os03g0269000 | - | Detail |
| C2H3g13848 | 3:7,883,000-7,884,692 | - | C1H3g14634 | CX3g030778 | LOC_Os03g16230 | Os03g0269100 | - | Detail |
| C2H3g30194 | 3:7,885,536-7,888,304 | - | C1H3g28190 | CX3g025228 | LOC_Os03g16260 | Os03g0269300 | - | Detail |
| C2H3g10990 | 3:7,894,181-7,896,570 | + | C1H3g05319 | CX3g030432 | LOC_Os03g16290 | Os03g0269700 | OsSSR1 | Detail |
| C2H3g12278 | 3:7,901,647-7,905,366 | + | C1H3g25495 | CX3g028676 | LOC_Os03g16334 | Os03g0269900 | - | Detail |
| C2H3g26039 | 3:7,911,493-7,912,269 | + | C1H3g15219 | CX3g030836 | LOC_Os03g16350 | Os03g0270000 | OsAHL7 | Detail |
| C2H3g09590 | 3:7,919,731-7,926,039 | - | C1H3g02158 | - | LOC_Os03g16369 | Os03g0270200 | - | Detail |
| C2H3g23864 | 3:7,922,946-7,923,374 | + | C1H3g05957 | CX3g031331 | - | Os03g0270300 | - | Detail |
| C2H3g17998 | 3:7,932,138-7,933,559 | - | C1H3g05634 | CX3g029608 | LOC_Os03g16390 | Os03g0270500 | - | Detail |
| C2H3g10987 | 3:7,937,716-7,941,557 | + | C1H3g18450 | CX3g031177 | LOC_Os03g16400 | Os01g0103800 | - | Detail |
| C2H3g15886 | 3:7,941,989-7,942,462 | - | C1H3g20566 | CX3g029680 | LOC_Os03g16410 | Os03g0270800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022088 | 2:30,504,739-30,508,625 | + | C1H2g17039 | C2H2g16691 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| CX2g019876 | 2:30,512,294-30,513,397 | - | C1H2g05581 | C2H2g16242 | LOC_Os02g54600 | Os02g0787300 | SMG1, OsMKK4, MKK4, OsMKK4/SMG1 | Detail |
| CX2g023310 | 2:30,528,086-30,529,745 | + | C1H2g05584 | C2H2g29050 | LOC_Os02g54624 | Os02g0787500 | - | Detail |
| CX2g020275 | 2:30,534,836-30,535,310 | + | C1H2g08821 | C2H2g29172 | - | - | - | Detail |
| CX2g024049 | 2:30,539,253-30,539,405 | + | - | - | - | - | - | Detail |
| CX2g019134 | 2:30,540,492-30,546,559 | + | C1H2g10849 | C2H2g09069 | LOC_Os02g54640 | Os02g0787600 | - | Detail |
| CX2g020090 | 2:30,548,048-30,555,092 | - | C1H2g10467 | C2H2g02130 | LOC_Os02g54650 | Os02g0787800 | - | Detail |
| CX2g023353 | 2:30,560,974-30,562,826 | + | C1H2g21285 | C2H2g22539 | LOC_Os02g54690 | Os02g0788300 | - | Detail |
| CX2g020480 | 2:30,563,683-30,565,451 | + | C1H2g03966 | C2H2g09842 | LOC_Os02g54700 | Os02g0788400 | - | Detail |
| CX2g024078 | 2:30,566,140-30,567,971 | - | C1H2g22475 | C2H2g24143 | LOC_Os02g54710 | Os02g0788500 | - | Detail |
| CX2g021585 | 2:30,568,858-30,569,514 | - | - | - | - | - | - | Detail |
| CX2g023832 | 2:30,571,114-30,571,290 | + | - | - | - | Os02g0188201 | - | Detail |
| CX2g019873 | 2:30,574,651-30,577,775 | - | C1H2g09302 | C2H2g15656 | LOC_Os02g54720 | Os02g0788600 | - | Detail |
| CX2g020788 | 2:30,583,648-30,589,411 | - | C1H2g25640 | C2H2g25995 | LOC_Os02g54730 | Os02g0788800 | - | Detail |
| CX2g023773 | 2:30,593,288-30,597,854 | - | C1H2g12627 | C2H2g28930 | LOC_Os02g54760 | Os02g0789100 | OsCNGC10 | Detail |
| CX2g023326 | 2:30,602,745-30,605,198 | - | C1H2g17369 | C2H2g03077 | LOC_Os02g54770 | Os02g0789400 | - | Detail |
| CX2g020292 | 2:30,605,551-30,608,252 | + | C1H2g16760 | C2H2g03583 | LOC_Os02g54780 | Os02g0789600 | - | Detail |
| CX2g023662 | 2:30,614,031-30,614,240 | + | - | - | - | - | - | Detail |
| CX2g019192 | 2:30,624,917-30,628,227 | + | C1H2g28936 | C2H2g28764 | LOC_Os02g54820 | - | - | Detail |
| CX2g022920 | 2:30,635,693-30,636,988 | - | C1H2g26730 | C2H2g18027 | LOC_Os02g54830 | Os02g0790600 | - | Detail |