| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17331 | 3:5,338,578-5,345,195 | + | C2H3g17746 | CX3g028416 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| C1H3g12951 | 3:5,345,585-5,351,080 | + | C2H3g08543 | CX3g030880 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| C1H3g14932 | 3:5,352,075-5,355,579 | + | C2H3g18859 | CX3g028514 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| C1H3g10644 | 3:5,356,021-5,361,678 | - | C2H3g25555 | CX3g029924 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| C1H3g04750 | 3:5,366,054-5,369,454 | - | C2H3g22606 | CX3g027534 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| C1H3g15538 | 3:5,371,578-5,375,503 | + | C2H3g22039 | CX3g027043 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| C1H3g09681 | 3:5,378,035-5,382,962 | - | C2H3g03744 | - | - | - | - | Detail |
| C1H3g00304 | 3:5,384,562-5,388,404 | - | C2H3g29664 | CX3g025722 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| C1H3g11825 | 3:5,415,400-5,421,453 | + | C2H3g24849 | CX3g029987 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| C1H3g00757 | 3:5,427,325-5,429,696 | - | C2H3g11270 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g04456 | 3:5,435,446-5,435,640 | - | C2H3g18287 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g30377 | 3:5,454,338-5,459,662 | + | C2H3g25916 | CX3g026583 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| C1H3g02997 | 3:5,460,442-5,463,830 | + | C2H3g12512 | CX3g026851 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| C1H3g12813 | 3:5,464,321-5,466,351 | - | C2H3g19342 | CX3g025630 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| C1H3g00186 | 3:5,474,194-5,475,087 | - | C2H3g13701 | CX3g030485 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| C1H3g15045 | 3:5,488,251-5,490,104 | + | C2H3g30038 | CX3g027591 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| C1H3g15740 | 3:5,491,793-5,492,971 | - | C2H3g05049 | CX3g029865 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| C1H3g17461 | 3:5,494,130-5,495,182 | - | C2H3g19799 | CX3g030660 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| C1H3g21782 | 3:5,501,406-5,505,435 | + | C2H3g02073 | CX3g030548 | LOC_Os03g11720 | Os03g0216600 | - | Detail |
| C1H3g16227 | 3:5,506,130-5,517,012 | - | C2H3g12443 | CX3g029221 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022088 | 2:30,504,739-30,508,625 | + | C1H2g17039 | C2H2g16691 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| CX2g019876 | 2:30,512,294-30,513,397 | - | C1H2g05581 | C2H2g16242 | LOC_Os02g54600 | Os02g0787300 | SMG1, OsMKK4, MKK4, OsMKK4/SMG1 | Detail |
| CX2g023310 | 2:30,528,086-30,529,745 | + | C1H2g05584 | C2H2g29050 | LOC_Os02g54624 | Os02g0787500 | - | Detail |
| CX2g020275 | 2:30,534,836-30,535,310 | + | C1H2g08821 | C2H2g29172 | - | - | - | Detail |
| CX2g024049 | 2:30,539,253-30,539,405 | + | - | - | - | - | - | Detail |
| CX2g019134 | 2:30,540,492-30,546,559 | + | C1H2g10849 | C2H2g09069 | LOC_Os02g54640 | Os02g0787600 | - | Detail |
| CX2g020090 | 2:30,548,048-30,555,092 | - | C1H2g10467 | C2H2g02130 | LOC_Os02g54650 | Os02g0787800 | - | Detail |
| CX2g023353 | 2:30,560,974-30,562,826 | + | C1H2g21285 | C2H2g22539 | LOC_Os02g54690 | Os02g0788300 | - | Detail |
| CX2g020480 | 2:30,563,683-30,565,451 | + | C1H2g03966 | C2H2g09842 | LOC_Os02g54700 | Os02g0788400 | - | Detail |
| CX2g024078 | 2:30,566,140-30,567,971 | - | C1H2g22475 | C2H2g24143 | LOC_Os02g54710 | Os02g0788500 | - | Detail |
| CX2g021585 | 2:30,568,858-30,569,514 | - | - | - | - | - | - | Detail |
| CX2g023832 | 2:30,571,114-30,571,290 | + | - | - | - | Os02g0188201 | - | Detail |
| CX2g019873 | 2:30,574,651-30,577,775 | - | C1H2g09302 | C2H2g15656 | LOC_Os02g54720 | Os02g0788600 | - | Detail |
| CX2g020788 | 2:30,583,648-30,589,411 | - | C1H2g25640 | C2H2g25995 | LOC_Os02g54730 | Os02g0788800 | - | Detail |
| CX2g023773 | 2:30,593,288-30,597,854 | - | C1H2g12627 | C2H2g28930 | LOC_Os02g54760 | Os02g0789100 | OsCNGC10 | Detail |
| CX2g023326 | 2:30,602,745-30,605,198 | - | C1H2g17369 | C2H2g03077 | LOC_Os02g54770 | Os02g0789400 | - | Detail |
| CX2g020292 | 2:30,605,551-30,608,252 | + | C1H2g16760 | C2H2g03583 | LOC_Os02g54780 | Os02g0789600 | - | Detail |
| CX2g023662 | 2:30,614,031-30,614,240 | + | - | - | - | - | - | Detail |
| CX2g019192 | 2:30,624,917-30,628,227 | + | C1H2g28936 | C2H2g28764 | LOC_Os02g54820 | - | - | Detail |
| CX2g022920 | 2:30,635,693-30,636,988 | - | C1H2g26730 | C2H2g18027 | LOC_Os02g54830 | Os02g0790600 | - | Detail |