| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09624 | 1:30,787,077-30,788,245 | - | C1H1g00772 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C2H1g09286 | 1:30,799,473-30,816,246 | - | C1H1g15712 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C2H1g26961 | 1:30,828,310-30,834,847 | - | C1H1g15897 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C2H1g04146 | 1:30,837,506-30,842,632 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C2H1g13967 | 1:30,844,373-30,844,582 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60070 | Os01g0816600 | - | Detail |
| C2H1g24791 | 1:30,845,806-30,847,272 | + | C1H1g24642 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g25178 | 1:30,847,362-30,847,664 | + | C1H1g24879 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g12383 | 1:30,852,593-30,855,794 | - | C1H1g23182 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C2H1g27536 | 1:30,858,990-30,862,426 | - | C1H1g20937 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C2H1g05301 | 1:30,867,420-30,870,525 | + | C1H1g16273 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C2H1g04044 | 1:30,871,690-30,872,622 | - | C1H1g15906 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C2H1g17170 | 1:30,884,562-30,888,327 | + | C1H1g14583 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C2H1g22450 | 1:30,888,779-30,892,097 | - | C1H1g28961 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C2H1g03576 | 1:30,903,588-30,907,758 | + | C1H1g28985 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C2H1g16399 | 1:30,911,405-30,912,871 | + | C1H1g10378 | CX1g005236 | - | Os01g0818100 | - | Detail |
| C2H1g17192 | 1:30,922,297-30,925,172 | + | C1H1g09654 | CX1g002636 | LOC_Os01g60260 | Os01g0818300 | - | Detail |
| C2H1g08644 | 1:30,931,215-30,934,712 | + | C1H1g30151 | CX1g003042 | LOC_Os01g60270 | Os01g0818400 | - | Detail |
| C2H1g07956 | 1:30,936,955-30,947,811 | - | C1H1g03453 | CX1g000179 | LOC_Os01g60280 | Os01g0818700 | - | Detail |
| C2H1g13182 | 1:30,953,125-30,956,828 | - | - | - | LOC_Os01g60290 | Os01g0818900 | - | Detail |
| C2H1g24195 | 1:30,956,541-30,960,942 | + | C1H1g23393 | CX1g001508 | LOC_Os01g60309 | Os01g0819000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024082 | 2:30,380,077-30,390,517 | + | C1H2g05909 | C2H2g11197 | LOC_Os02g54290 | Os02g0784100 | - | Detail |
| CX2g024797 | 2:30,391,429-30,392,027 | + | C1H2g27647 | C2H2g14301 | LOC_Os02g54180 | Os02g0782900 | - | Detail |
| CX2g021961 | 2:30,392,451-30,394,903 | - | C1H2g29232 | C2H2g06014 | LOC_Os02g54190 | Os02g0783000 | - | Detail |
| CX2g023276 | 2:30,397,308-30,398,648 | - | C1H2g04161 | C2H2g04597 | LOC_Os02g54200 | Os02g0783100 | - | Detail |
| CX2g023139 | 2:30,406,162-30,417,132 | + | C1H2g13030 | C2H2g29612 | LOC_Os02g54254 | Os02g0783700 | OsLKR/SDH | Detail |
| CX2g021182 | 2:30,420,649-30,424,188 | - | C1H2g23112 | C2H2g09783 | LOC_Os02g54340 | Os02g0784700 | OsRpt1b | Detail |
| CX2g021993 | 2:30,426,982-30,427,458 | - | C1H2g28654 | C2H2g10153 | LOC_Os02g54360 | Os02g0784900 | - | Detail |
| CX2g021080 | 2:30,427,875-30,428,372 | - | - | - | LOC_Os02g50440 | - | - | Detail |
| CX2g020982 | 2:30,429,582-30,430,568 | - | C1H6g31613 | C2H2g12061 | LOC_Os02g54370 | Os02g0785000 | - | Detail |
| CX2g023412 | 2:30,433,664-30,434,590 | - | C1H6g31613 | C2H2g12917 | LOC_Os02g54390 | Os02g0785200 | - | Detail |
| CX2g021341 | 2:30,437,881-30,438,810 | - | C1H6g31613 | C2H2g03301 | LOC_Os02g54420 | Os02g0785200 | - | Detail |
| CX2g024909 | 2:30,441,262-30,442,203 | - | C1H6g31613 | C2H2g13421 | LOC_Os02g54450 | Os02g0785700 | - | Detail |
| CX2g022096 | 2:30,444,899-30,445,426 | + | C1H2g22630 | C2H2g09400 | LOC_Os02g54470 | Os02g0785800 | - | Detail |
| CX2g021693 | 2:30,447,614-30,455,357 | + | C1H2g16607 | C2H2g24301 | LOC_Os02g54490 | Os02g0785900 | - | Detail |
| CX2g024703 | 2:30,457,295-30,465,000 | + | C1H2g04640 | C2H2g16599 | LOC_Os02g54500 | Os02g0786000 | - | Detail |
| CX2g019009 | 2:30,471,942-30,476,400 | + | C1H2g14270 | C2H2g21668 | LOC_Os02g54510 | Os02g0786200 | - | Detail |
| CX2g024716 | 2:30,484,915-30,487,526 | + | C1H2g29436 | C2H2g02803 | LOC_Os02g54520 | Os02g0786400 | OsMYB36b | Detail |
| CX2g020771 | 2:30,497,084-30,497,680 | + | C1H2g01457 | C2H2g17982 | LOC_Os02g54560 | Os02g0786900 | - | Detail |
| CX2g023717 | 2:30,498,570-30,499,049 | - | C1H2g13395 | C2H2g09660 | LOC_Os02g54570 | Os02g0787000 | - | Detail |
| CX2g022090 | 2:30,500,384-30,504,164 | + | C1H2g05721 | C2H2g14363 | LOC_Os02g54580 | Os02g0787100 | - | Detail |