| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03150 | 5:19,704,652-19,705,368 | + | C2H5g28435 | CX5g038773 | LOC_Os05g40950 | Os05g0488500 | - | Detail |
| C1H5g10864 | 5:19,706,559-19,708,748 | - | C2H5g15684 | CX5g037471 | LOC_Os05g40960 | Os05g0488600 | - | Detail |
| C1H5g29301 | 5:19,715,415-19,716,386 | - | C2H5g10762 | CX5g036864 | LOC_Os05g40980 | Os05g0488800 | OsSIRP1, SIRP1 | Detail |
| C1H5g30435 | 5:19,718,925-19,721,518 | + | C2H5g22368 | CX5g038499 | LOC_Os05g40990 | Os05g0488900 | - | Detail |
| C1H5g00494 | 5:19,724,120-19,729,605 | + | C2H5g07104 | CX5g038470 | LOC_Os05g41000 | Os05g0489000 | - | Detail |
| C1H5g12778 | 5:19,731,257-19,733,469 | + | C2H5g00595 | CX5g040097 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| C1H5g22216 | 5:19,735,943-19,737,161 | - | C2H5g23469 | - | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C1H5g05615 | 5:19,737,619-19,738,035 | - | C2H5g15924 | CX5g037795 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C1H5g29364 | 5:19,741,494-19,744,765 | - | C2H5g27372 | CX5g037436 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| C1H5g11382 | 5:19,747,970-19,750,342 | + | C2H5g09500 | CX5g037252 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| C1H5g00326 | 5:19,752,002-19,752,268 | + | C2H5g01943 | CX5g039059 | - | Os05g0489750 | - | Detail |
| C1H5g30374 | 5:19,753,024-19,755,252 | - | C2H5g05322 | CX5g039132 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| C1H5g17926 | 5:19,756,621-19,760,399 | - | C2H5g07453 | CX5g038078 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| C1H5g27285 | 5:19,761,302-19,763,281 | - | C2H5g20839 | CX5g037785 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| C1H5g14042 | 5:19,763,521-19,765,356 | + | C2H5g02383 | CX5g039362 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| C1H5g00258 | 5:19,766,408-19,772,462 | + | C2H5g16191 | CX5g038500 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| C1H5g17707 | 5:19,775,358-19,776,413 | - | C2H5g27761 | CX5g037621 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| C1H5g17579 | 5:19,784,564-19,791,022 | - | C2H5g07017 | CX5g039490 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| C1H5g31086 | 5:19,792,040-19,794,897 | - | C2H5g07145 | CX5g038921 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| C1H5g16631 | 5:19,798,346-19,804,273 | - | C2H5g25171 | CX5g037848 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006893 | 1:12,347,294-12,353,876 | - | C1H1g05405 | C2H1g19385 | LOC_Os01g24430 | Os01g0343400 | - | Detail |
| CX1g001392 | 1:12,363,807-12,364,952 | + | C1H1g21970 | C2H1g07465 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| CX1g001821 | 1:12,373,554-12,374,525 | - | - | - | LOC_Os01g25130 | - | - | Detail |
| CX1g003017 | 1:12,380,101-12,380,328 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g005366 | 1:12,383,842-12,384,747 | + | C1H1g27053 | C2H1g19331 | LOC_Os01g24430 | Os01g0347200 | - | Detail |
| CX1g001811 | 1:12,397,392-12,397,907 | + | C1H1g13768 | C2H1g13415 | - | Os01g0527900 | - | Detail |
| CX1g002117 | 1:12,415,261-12,416,436 | + | C1H1g21970 | C2H1g07465 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| CX1g002633 | 1:12,418,815-12,420,032 | + | C1H1g27053 | C2H1g01248 | LOC_Os01g24430 | Os01g0346600 | - | Detail |
| CX1g002147 | 1:12,422,703-12,423,236 | - | - | - | LOC_Os01g24440 | Os01g0346700 | - | Detail |
| CX1g000316 | 1:12,441,399-12,444,540 | + | - | - | LOC_Os01g24460 | Os01g0346900 | NF-YC10, OsNF-YC10 | Detail |
| CX1g002994 | 1:12,449,634-12,454,055 | + | C1H1g27382 | C2H1g25406 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| CX1g000129 | 1:12,454,865-12,458,881 | - | C1H1g08071 | C2H1g02246 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| CX1g002181 | 1:12,463,858-12,465,084 | - | C1H1g27053 | C2H1g19331 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| CX1g006871 | 1:12,471,398-12,473,055 | + | C1H1g27449 | C2H1g13817 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| CX1g004946 | 1:12,479,804-12,480,970 | - | C1H1g19455 | C2H1g00502 | LOC_Os01g24600 | Os01g0348000 | - | Detail |
| CX1g005827 | 1:12,489,894-12,491,019 | + | C1H1g19481 | C2H1g29017 | LOC_Os01g24570 | Os01g0347600 | - | Detail |
| CX1g002830 | 1:12,503,058-12,504,171 | - | C1H1g19481 | C2H1g29017 | LOC_Os01g24570 | Os01g0347600 | - | Detail |
| CX1g001042 | 1:12,507,283-12,508,458 | + | C1H1g09482 | C2H1g00502 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| CX1g006599 | 1:12,511,298-12,511,675 | - | - | - | LOC_Os01g28882 | - | - | Detail |
| CX1g000047 | 1:12,525,163-12,530,483 | + | C1H1g02190 | C2H1g02997 | LOC_Os01g24680 | Os01g0348600 | - | Detail |