| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08088 | 1:23,044,591-23,047,367 | + | C1H1g31055 | CX1g002458 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| C2H1g22980 | 1:23,046,848-23,048,906 | - | C1H1g10058 | CX1g004617 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| C2H1g13504 | 1:23,051,648-23,054,849 | - | C1H1g19962 | CX1g003997 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| C2H1g09207 | 1:23,055,650-23,059,742 | + | C1H1g17185 | CX1g000116 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| C2H1g17482 | 1:23,061,086-23,064,129 | + | C1H1g25061 | CX1g004780 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| C2H1g02385 | 1:23,078,541-23,081,482 | - | C1H1g31552 | CX1g004195 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| C2H1g03402 | 1:23,086,625-23,088,923 | + | C1H1g00902 | CX1g003051 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| C2H1g07647 | 1:23,090,833-23,091,147 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642000 | - | Detail |
| C2H1g14331 | 1:23,091,174-23,098,582 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| C2H1g23910 | 1:23,098,762-23,099,498 | - | C1H1g06064 | - | LOC_Os01g45470 | Os01g0642200 | - | Detail |
| C2H1g05902 | 1:23,132,843-23,134,398 | + | C1H1g02209 | CX1g000192 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| C2H1g10748 | 1:23,134,990-23,137,497 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g09079 | 1:23,137,588-23,138,064 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g05185 | 1:23,155,106-23,159,500 | + | C1H1g21876 | CX1g003646 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| C2H1g02636 | 1:23,170,308-23,173,345 | - | C1H1g25133 | CX1g003628 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| C2H1g17274 | 1:23,188,624-23,193,473 | - | C1H1g17824 | CX1g005269 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C2H1g01755 | 1:23,197,092-23,198,684 | + | C1H1g14596 | CX1g004663 | LOC_Os01g45640 | Os01g0644000 | - | Detail |
| C2H1g00660 | 1:23,216,768-23,217,823 | - | C1H1g08154 | CX1g003016 | LOC_Os01g45730 | Os01g0645000 | - | Detail |
| C2H1g06994 | 1:23,226,508-23,233,386 | + | C1H1g06404 | CX1g001972 | LOC_Os01g45750 | Os01g0645200 | - | Detail |
| C2H1g23683 | 1:23,246,717-23,248,981 | + | C1H1g20018 | CX1g005018 | LOC_Os01g45760 | Os01g0645400 | YUCCA1, OsYUCCA1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023674 | 2:29,747,632-29,750,657 | - | C1H2g18310 | C2H2g26172 | LOC_Os02g53130 | Os02g0770800 | OsNR2 | Detail |
| CX2g022775 | 2:29,757,369-29,762,648 | - | C1H2g12369 | C2H2g22279 | LOC_Os02g53140 | Os02g0771100 | - | Detail |
| CX2g023975 | 2:29,764,925-29,765,875 | - | C1H2g19267 | C2H2g10360 | LOC_Os02g53150 | Os02g0771200 | - | Detail |
| CX2g021890 | 2:29,767,041-29,769,889 | - | C1H2g25896 | C2H2g23947 | LOC_Os02g56290 | Os02g0513700 | - | Detail |
| CX2g022905 | 2:29,771,829-29,775,903 | - | C1H2g23321 | C2H2g07592 | LOC_Os02g53160 | Os02g0771400 | - | Detail |
| CX2g024201 | 2:29,779,408-29,779,623 | - | - | - | - | - | - | Detail |
| CX2g021916 | 2:29,796,908-29,798,829 | + | C1H2g22568 | C2H2g20257 | LOC_Os02g53180 | Os02g0771600 | ACO3, OsACO3 | Detail |
| CX2g021006 | 2:29,800,586-29,803,364 | - | C1H2g24159 | C2H2g29895 | LOC_Os02g53200 | Os02g0771700 | - | Detail |
| CX2g024777 | 2:29,807,082-29,813,325 | - | C1H2g16264 | C2H2g04485 | LOC_Os02g53210 | Os02g0771800 | - | Detail |
| CX2g020977 | 2:29,818,137-29,818,295 | - | - | - | - | - | - | Detail |
| CX2g022902 | 2:29,819,529-29,830,276 | + | C1H2g02348 | C2H2g18526 | LOC_Os02g53230 | Os02g0772000 | OsSPT5-2 | Detail |
| CX2g024189 | 2:29,831,590-29,831,853 | - | C1H2g26130 | C2H2g03730 | LOC_Os02g53250 | Os02g0772200 | - | Detail |
| CX2g024622 | 2:29,833,832-29,836,124 | + | C1H2g11093 | C2H2g25549 | LOC_Os02g53260 | Os02g0772300 | - | Detail |
| CX2g021573 | 2:29,837,819-29,846,394 | + | C1H2g09184 | C2H2g06676 | LOC_Os02g53270 | Os02g0772500 | - | Detail |
| CX2g020239 | 2:29,847,823-29,850,728 | - | C1H2g18055 | C2H2g12559 | LOC_Os02g53280 | Os02g0772600 | - | Detail |
| CX2g018931 | 2:29,857,075-29,857,224 | - | - | - | - | - | - | Detail |
| CX2g019717 | 2:29,862,740-29,862,904 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g024470 | 2:29,878,739-29,879,613 | + | C1H2g02313 | C2H2g06283 | LOC_Os02g53320 | Os02g0773200 | - | Detail |
| CX2g019558 | 2:29,880,255-29,883,443 | - | C1H2g08102 | C2H2g25592 | LOC_Os02g53330 | Os02g0773300 | OsDCD1 | Detail |
| CX2g021420 | 2:29,885,268-29,893,105 | + | C1H2g25749 | C2H2g27938 | LOC_Os02g53340 | Os02g0773400 | OsCNGC12 | Detail |