| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25606 | 3:5,617,924-5,626,626 | - | C1H3g11455 | CX3g031100 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| C2H3g28200 | 3:5,629,758-5,631,757 | - | C1H3g05328 | CX3g028642 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| C2H3g21744 | 3:5,655,861-5,657,114 | + | C1H3g10920 | - | LOC_Os03g12210 | Os03g0222500 | - | Detail |
| C2H3g09344 | 3:5,664,107-5,666,372 | + | C1H3g07232 | CX3g031317 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| C2H3g04698 | 3:5,668,849-5,673,629 | + | C1H3g04972 | CX3g028958 | LOC_Os03g12236 | Os03g0222700 | - | Detail |
| C2H3g19892 | 3:5,674,920-5,676,941 | + | C1H3g26972 | CX3g027447 | LOC_Os03g12238 | - | - | Detail |
| C2H3g10667 | 3:5,679,824-5,684,019 | + | C1H3g14957 | CX3g031278 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| C2H3g29015 | 3:5,690,854-5,692,440 | - | C1H3g14297 | CX3g030840 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| C2H3g13113 | 3:5,697,671-5,700,203 | + | C1H3g13087 | CX3g029663 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| C2H3g16993 | 3:5,702,030-5,703,478 | - | C1H3g19225 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g28472 | 3:5,703,831-5,706,150 | - | C1H3g05930 | CX3g028859 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| C2H3g01042 | 3:5,710,893-5,718,986 | - | C1H3g02751 | CX3g025777 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| C2H3g20060 | 3:5,730,175-5,734,820 | + | C1H3g05662 | CX3g029397 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| C2H3g29213 | 3:5,743,380-5,748,702 | + | C1H3g16565 | CX3g029992 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| C2H3g11335 | 3:5,749,246-5,753,687 | - | C1H3g12418 | CX3g029383 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| C2H3g05885 | 3:5,765,625-5,769,411 | + | C1H3g18389 | CX3g025920 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| C2H3g25300 | 3:5,773,342-5,774,361 | - | C1H3g09012 | CX3g025136 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| C2H3g05543 | 3:5,781,025-5,785,623 | - | C1H3g14793 | CX3g027495 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| C2H3g22350 | 3:5,787,025-5,788,437 | - | C1H3g12506 | CX3g027176 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| C2H3g21341 | 3:5,789,758-5,791,688 | + | C1H3g26939 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019177 | 2:29,573,939-29,579,593 | - | C1H2g22835 | C2H2g28311 | LOC_Os02g52880 | Os02g0767700 | - | Detail |
| CX2g022279 | 2:29,587,342-29,587,491 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g020174 | 2:29,597,903-29,598,528 | + | C1H2g13024 | C2H2g16642 | LOC_Os02g52900 | Os02g0767900 | - | Detail |
| CX2g023130 | 2:29,600,607-29,602,265 | - | C1H2g31571 | C2H2g15864 | LOC_Os02g52910 | Os02g0768000 | - | Detail |
| CX2g024813 | 2:29,603,128-29,605,796 | - | C1H2g24818 | C2H2g21836 | LOC_Os02g52920 | Os02g0768200 | - | Detail |
| CX2g021956 | 2:29,608,681-29,611,134 | - | C1H2g14907 | C2H2g10491 | LOC_Os02g52930 | Os02g0768300 | - | Detail |
| CX2g021495 | 2:29,615,771-29,616,126 | - | - | C2H2g22351 | - | - | - | Detail |
| CX2g022546 | 2:29,619,275-29,622,254 | + | C1H2g22451 | C2H2g21002 | LOC_Os02g52940 | Os02g0768600 | OsPPa6 | Detail |
| CX2g018930 | 2:29,624,715-29,625,560 | - | - | C2H2g28173 | LOC_Os02g52950 | Os02g0768700 | - | Detail |
| CX2g021081 | 2:29,629,465-29,639,920 | + | C1H2g22170 | C2H2g14167 | LOC_Os02g52960 | Os02g0768800 | - | Detail |
| CX2g020881 | 2:29,651,952-29,652,335 | + | - | C2H2g23013 | LOC_Os02g52990 | Os02g0769100 | - | Detail |
| CX2g022388 | 2:29,659,182-29,662,352 | - | C1H2g01556 | C2H2g22383 | LOC_Os02g53000 | Os02g0769200 | - | Detail |
| CX2g021520 | 2:29,678,384-29,678,701 | - | - | - | - | - | - | Detail |
| CX2g024725 | 2:29,683,419-29,690,206 | + | C1H2g05767 | C2H2g24589 | LOC_Os02g53040 | Os02g0769800 | - | Detail |
| CX2g024823 | 2:29,691,311-29,692,795 | - | C1H2g17305 | C2H2g13140 | LOC_Os02g53050 | Os02g0769900 | - | Detail |
| CX2g020922 | 2:29,693,572-29,697,292 | - | C1H2g04464 | C2H2g15499 | LOC_Os02g53060 | Os02g0770000 | - | Detail |
| CX2g024835 | 2:29,698,966-29,701,373 | - | C1H2g27490 | C2H2g02912 | LOC_Os02g53070 | Os02g0770100 | OsCPR5.2 | Detail |
| CX2g024218 | 2:29,718,843-29,721,329 | + | C1H2g19553 | C2H2g00012 | LOC_Os02g53100 | Os02g0770500 | - | Detail |
| CX2g020351 | 2:29,727,287-29,728,237 | + | C1H2g20936 | C2H2g11055 | LOC_Os02g53110 | Os02g0770600 | - | Detail |
| CX2g018960 | 2:29,729,133-29,743,766 | - | C1H2g21424 | C2H2g24714 | LOC_Os02g53120 | Os02g0770700 | - | Detail |