| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20138 | 4:21,074,128-21,076,094 | - | C1H4g21499 | CX4g034396 | LOC_Os04g41160 | Os04g0488700 | - | Detail |
| C2H4g16331 | 4:21,090,214-21,094,826 | - | C1H4g17621 | CX4g033270 | LOC_Os04g41200 | Os04g0489100 | - | Detail |
| C2H4g30667 | 4:21,097,406-21,098,273 | - | C1H4g14434 | CX4g036668 | - | Os04g0489200 | - | Detail |
| C2H4g29111 | 4:21,103,085-21,112,991 | + | C1H4g13969 | CX4g034720 | LOC_Os04g41229 | Os04g0489600 | OsbHLH111, OsSGI1, HBP1 | Detail |
| C2H4g26329 | 4:21,118,979-21,122,492 | + | C1H4g01937 | CX4g033639 | LOC_Os04g41250 | Os04g0489800 | RHS1 | Detail |
| C2H4g08737 | 4:21,124,232-21,132,233 | + | C1H4g19439 | CX4g032470 | LOC_Os04g41260 | Os04g0490100 | - | Detail |
| C2H4g00670 | 4:21,138,835-21,139,794 | + | C1H4g19266 | - | LOC_Os04g41280 | - | - | Detail |
| C2H4g11492 | 4:21,143,455-21,146,792 | + | C1H4g19266 | CX4g034755 | LOC_Os04g41280 | Os04g0490300 | - | Detail |
| C2H4g26467 | 4:21,147,485-21,149,945 | - | C1H4g25635 | CX4g034054 | LOC_Os04g41300 | Os04g0490400 | - | Detail |
| C2H4g17263 | 4:21,153,742-21,156,513 | + | C1H4g02046 | CX4g036414 | LOC_Os04g41310 | Os04g0490500 | - | Detail |
| C2H4g06465 | 4:21,156,771-21,162,890 | - | C1H4g27608 | CX4g031476 | LOC_Os04g41320 | Os04g0490600 | - | Detail |
| C2H4g14336 | 4:21,171,396-21,173,378 | + | - | CX4g035361 | LOC_Os04g41330 | Os04g0490700 | - | Detail |
| C2H4g18442 | 4:21,173,890-21,176,469 | - | C1H4g22577 | CX4g031967 | LOC_Os04g41340 | Os04g0490800 | OsPGLP1 | Detail |
| C2H4g17626 | 4:21,180,461-21,182,268 | + | C1H4g24056 | CX4g036249 | LOC_Os04g41350 | Os04g0490900 | - | Detail |
| C2H4g02527 | 4:21,187,902-21,190,658 | + | C1H4g30101 | CX4g033718 | LOC_Os04g41380 | Os04g0491100 | - | Detail |
| C2H4g11306 | 4:21,193,349-21,200,488 | - | C1H4g24917 | CX4g035441 | LOC_Os04g41400 | Os04g0491500 | - | Detail |
| C2H4g18826 | 4:21,207,246-21,210,326 | - | C1H4g15315 | CX4g036387 | LOC_Os04g41450 | Os04g0491500 | - | Detail |
| C2H4g07651 | 4:21,211,932-21,216,391 | - | C1H4g21111 | CX4g035327 | LOC_Os04g41460 | Os04g0491700 | OsINT1 | Detail |
| C2H4g12997 | 4:21,223,394-21,230,605 | + | C1H4g17364 | CX4g033387 | LOC_Os04g41470 | Os04g0492100 | - | Detail |
| C2H4g29458 | 4:21,234,162-21,245,817 | + | C1H4g17746 | CX4g034732 | LOC_Os04g41490 | Os04g0492300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024148 | 2:29,448,682-29,451,518 | + | C1H2g09761 | C2H2g18956 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| CX2g023343 | 2:29,458,745-29,461,885 | + | C1H2g26295 | C2H2g02605 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| CX2g019855 | 2:29,465,113-29,467,702 | + | C1H2g14291 | C2H2g18172 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| CX2g022219 | 2:29,474,502-29,476,325 | - | C1H2g16728 | C2H2g26785 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| CX2g021656 | 2:29,478,527-29,479,126 | - | C1H2g27118 | C2H2g22917 | LOC_Os02g52670 | Os02g0764700 | OsERF103 | Detail |
| CX2g021576 | 2:29,482,828-29,483,673 | + | - | C2H2g07248 | LOC_Os02g50805 | Os02g0231600 | - | Detail |
| CX2g018991 | 2:29,494,343-29,496,056 | + | C1H2g10581 | C2H2g26543 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| CX2g021489 | 2:29,498,406-29,500,000 | - | C1H2g08973 | C2H2g29404 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| CX2g019501 | 2:29,503,530-29,504,207 | - | C1H2g26635 | C2H2g24763 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| CX2g022397 | 2:29,506,919-29,510,750 | - | C1H2g13987 | C2H2g20003 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| CX2g019269 | 2:29,517,214-29,518,064 | + | C1H2g23770 | C2H2g16702 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| CX2g021391 | 2:29,520,552-29,524,796 | - | C1H2g16420 | C2H2g14916 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| CX2g023223 | 2:29,526,656-29,528,797 | - | C1H2g21062 | C2H2g08910 | LOC_Os02g52800 | Os02g0766900 | - | Detail |
| CX2g024302 | 2:29,532,779-29,537,569 | - | C1H2g20452 | C2H2g10227 | LOC_Os02g52810 | Os02g0767000 | - | Detail |
| CX2g022681 | 2:29,541,067-29,545,594 | + | C1H2g09699 | C2H2g03870 | LOC_Os02g52820 | Os02g0767100 | - | Detail |
| CX2g018835 | 2:29,546,445-29,549,701 | - | C1H2g10695 | C2H2g04249 | LOC_Os02g52830 | Os02g0767200 | - | Detail |
| CX2g023288 | 2:29,558,282-29,559,461 | - | C1H2g09946 | C2H2g14519 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| CX2g019076 | 2:29,560,504-29,562,111 | - | C1H2g24330 | C2H2g22142 | LOC_Os02g52850 | Os02g0767400 | SDRLK-59 | Detail |
| CX2g023311 | 2:29,567,003-29,570,479 | - | C1H2g03367 | C2H2g08643 | LOC_Os02g52860 | Os02g0767500 | - | Detail |
| CX2g020134 | 2:29,572,061-29,573,277 | + | C1H2g00086 | C2H2g01609 | LOC_Os02g52870 | Os02g0767600 | - | Detail |