| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04344 | 3:30,593,979-30,595,550 | - | C2H3g00025 | CX3g024980 | - | Os03g0788400 | - | Detail |
| C1H3g21023 | 3:30,603,009-30,606,591 | - | C2H3g20845 | CX3g028954 | LOC_Os03g57460 | Os03g0788600 | - | Detail |
| C1H3g02916 | 3:30,612,335-30,614,519 | - | C2H3g11681 | CX3g029789 | LOC_Os03g57490 | Os03g0788700 | - | Detail |
| C1H3g14412 | 3:30,615,909-30,618,679 | - | C2H3g01053 | CX3g025061 | LOC_Os03g57500 | Os03g0788800 | - | Detail |
| C1H3g20374 | 3:30,622,503-30,627,055 | - | C2H3g08306 | CX3g026284 | LOC_Os03g57510 | Os03g0789000 | OsCPK11 | Detail |
| C1H3g27441 | 3:30,631,258-30,633,770 | - | C2H3g21152 | CX3g025673 | LOC_Os03g57530 | Os03g0789200 | - | Detail |
| C1H3g01724 | 3:30,659,650-30,660,174 | - | - | CX3g027319 | - | - | - | Detail |
| C1H3g19990 | 3:30,669,312-30,669,641 | + | C2H3g18299 | - | - | - | - | Detail |
| C1H3g05168 | 3:30,669,643-30,677,057 | + | C2H3g25100 | CX3g027159 | LOC_Os03g57660 | Os03g0790600 | - | Detail |
| C1H3g25796 | 3:30,680,199-30,681,435 | + | C2H3g02735 | CX3g025144 | LOC_Os03g57670 | Os03g0287400 | - | Detail |
| C1H3g12742 | 3:30,681,910-30,689,884 | - | C2H3g18816 | CX3g027496 | LOC_Os03g57680 | Os03g0790700 | - | Detail |
| C1H3g06993 | 3:30,691,536-30,700,999 | - | C2H3g15282 | CX3g030157 | LOC_Os03g57690 | Os03g0790900 | - | Detail |
| C1H3g17242 | 3:30,710,081-30,710,584 | + | C2H3g05171 | CX3g027509 | LOC_Os03g57730 | Os03g0791300 | - | Detail |
| C1H3g26562 | 3:30,711,744-30,712,386 | - | C2H3g06575 | CX3g026538 | LOC_Os03g57740 | Os03g0791366 | - | Detail |
| C1H3g19140 | 3:30,716,070-30,719,684 | - | C2H3g19278 | CX3g027735 | LOC_Os03g57760 | Os03g0791500 | - | Detail |
| C1H3g21231 | 3:30,727,875-30,732,449 | + | C2H3g14760 | CX3g026148 | LOC_Os03g57780 | Os03g0791700 | - | Detail |
| C1H3g19040 | 3:30,732,520-30,738,747 | - | C2H3g30214 | CX3g026973 | LOC_Os03g57790 | Os03g0791800 | OsRad6 | Detail |
| C1H3g04638 | 3:30,744,174-30,749,329 | + | C2H3g19877 | CX3g031118 | LOC_Os03g57840 | Os03g0792400 | - | Detail |
| C1H3g06972 | 3:30,750,982-30,751,446 | + | C2H3g20217 | CX3g026059 | LOC_Os03g57854 | Os03g0792500 | - | Detail |
| C1H3g08271 | 3:30,752,753-30,757,029 | + | C2H3g15262 | CX3g027727 | LOC_Os03g57854 | Os03g0792500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024148 | 2:29,448,682-29,451,518 | + | C1H2g09761 | C2H2g18956 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| CX2g023343 | 2:29,458,745-29,461,885 | + | C1H2g26295 | C2H2g02605 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| CX2g019855 | 2:29,465,113-29,467,702 | + | C1H2g14291 | C2H2g18172 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| CX2g022219 | 2:29,474,502-29,476,325 | - | C1H2g16728 | C2H2g26785 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| CX2g021656 | 2:29,478,527-29,479,126 | - | C1H2g27118 | C2H2g22917 | LOC_Os02g52670 | Os02g0764700 | OsERF103 | Detail |
| CX2g021576 | 2:29,482,828-29,483,673 | + | - | C2H2g07248 | LOC_Os02g50805 | Os02g0231600 | - | Detail |
| CX2g018991 | 2:29,494,343-29,496,056 | + | C1H2g10581 | C2H2g26543 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| CX2g021489 | 2:29,498,406-29,500,000 | - | C1H2g08973 | C2H2g29404 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| CX2g019501 | 2:29,503,530-29,504,207 | - | C1H2g26635 | C2H2g24763 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| CX2g022397 | 2:29,506,919-29,510,750 | - | C1H2g13987 | C2H2g20003 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| CX2g019269 | 2:29,517,214-29,518,064 | + | C1H2g23770 | C2H2g16702 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| CX2g021391 | 2:29,520,552-29,524,796 | - | C1H2g16420 | C2H2g14916 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| CX2g023223 | 2:29,526,656-29,528,797 | - | C1H2g21062 | C2H2g08910 | LOC_Os02g52800 | Os02g0766900 | - | Detail |
| CX2g024302 | 2:29,532,779-29,537,569 | - | C1H2g20452 | C2H2g10227 | LOC_Os02g52810 | Os02g0767000 | - | Detail |
| CX2g022681 | 2:29,541,067-29,545,594 | + | C1H2g09699 | C2H2g03870 | LOC_Os02g52820 | Os02g0767100 | - | Detail |
| CX2g018835 | 2:29,546,445-29,549,701 | - | C1H2g10695 | C2H2g04249 | LOC_Os02g52830 | Os02g0767200 | - | Detail |
| CX2g023288 | 2:29,558,282-29,559,461 | - | C1H2g09946 | C2H2g14519 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| CX2g019076 | 2:29,560,504-29,562,111 | - | C1H2g24330 | C2H2g22142 | LOC_Os02g52850 | Os02g0767400 | SDRLK-59 | Detail |
| CX2g023311 | 2:29,567,003-29,570,479 | - | C1H2g03367 | C2H2g08643 | LOC_Os02g52860 | Os02g0767500 | - | Detail |
| CX2g020134 | 2:29,572,061-29,573,277 | + | C1H2g00086 | C2H2g01609 | LOC_Os02g52870 | Os02g0767600 | - | Detail |