| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00076 | 3:8,821,643-8,824,285 | + | C1H3g16506 | CX3g029623 | LOC_Os03g17990 | Os03g0289200 | - | Detail |
| C2H3g12597 | 3:8,827,655-8,831,012 | + | C1H3g21351 | CX3g025090 | LOC_Os03g18010 | Os03g0289300 | - | Detail |
| C2H3g05021 | 3:8,831,918-8,833,281 | + | C1H3g12635 | CX3g029991 | LOC_Os03g18020 | Os03g0289400 | - | Detail |
| C2H3g09473 | 3:8,839,795-8,844,816 | - | C1H3g24871 | CX3g030981 | LOC_Os03g18030 | Os03g0289800 | OsLDOX2 | Detail |
| C2H3g08584 | 3:8,867,101-8,870,248 | - | C1H3g18241 | CX3g025852 | LOC_Os03g18070 | Os03g0290300 | OsFAD7 | Detail |
| C2H3g10954 | 3:8,876,151-8,877,043 | - | C1H3g19780 | - | - | Os03g0290400 | - | Detail |
| C2H3g13012 | 3:8,877,967-8,885,760 | - | C1H3g18917 | CX3g025324 | LOC_Os03g18080 | Os03g0290500 | - | Detail |
| C2H3g23225 | 3:8,891,979-8,893,790 | + | C1H3g30153 | CX3g026472 | LOC_Os03g18110 | Os03g0290900 | - | Detail |
| C2H3g10304 | 3:8,902,619-8,906,132 | + | C1H3g18009 | CX3g026408 | LOC_Os03g18120 | Os03g0291200 | - | Detail |
| C2H3g15096 | 3:8,906,050-8,910,344 | - | C1H3g24409 | CX3g030158 | LOC_Os03g18130 | Os03g0291500 | ASN1, OsASN1, OsAS1, AS1 | Detail |
| C2H3g11917 | 3:8,933,332-8,938,306 | + | C1H3g22391 | CX3g029744 | LOC_Os03g18140 | Os03g0291800 | - | Detail |
| C2H3g26678 | 3:8,946,414-8,948,421 | + | C1H3g05911 | CX3g026643 | LOC_Os03g18150 | Os03g0292100 | - | Detail |
| C2H3g20112 | 3:8,957,779-8,960,090 | + | C1H3g07369 | CX3g027477 | LOC_Os03g18160 | Os03g0292200 | - | Detail |
| C2H3g05672 | 3:8,970,630-8,972,015 | + | C1H3g17889 | CX3g030839 | LOC_Os03g18170 | Os03g0292700 | - | Detail |
| C2H3g30223 | 3:8,974,461-8,976,844 | - | C1H3g01237 | CX3g025459 | LOC_Os03g18180 | Os03g0292800 | - | Detail |
| C2H3g08063 | 3:8,977,738-8,978,617 | + | C1H3g01195 | CX3g030714 | - | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g00182 | 3:8,980,116-8,989,686 | - | C1H3g09425 | CX3g026640 | LOC_Os03g18190 | Os03g0292900 | - | Detail |
| C2H3g24196 | 3:8,992,468-8,997,478 | + | C1H3g30417 | CX3g027666 | LOC_Os03g18200 | Os03g0293000 | - | Detail |
| C2H3g19840 | 3:8,998,182-8,999,327 | + | C1H3g18813 | CX3g029007 | LOC_Os03g18200 | Os03g0293100 | - | Detail |
| C2H3g15900 | 3:9,001,550-9,004,961 | + | C1H3g03257 | CX3g030471 | LOC_Os03g18210 | Os03g0293400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023574 | 2:29,204,109-29,204,999 | + | C1H2g23218 | C2H2g03437 | LOC_Os02g47480 | Os02g0592600 | - | Detail |
| CX2g020566 | 2:29,211,830-29,215,677 | - | C1H2g00307 | C2H2g01455 | LOC_Os02g52140 | Os02g0757900 | - | Detail |
| CX2g023549 | 2:29,216,056-29,216,822 | + | C1H2g27632 | C2H2g25477 | LOC_Os02g52150 | Os02g0758000 | - | Detail |
| CX2g019237 | 2:29,217,428-29,217,709 | - | C1H2g27632 | C2H2g25477 | LOC_Os02g52150 | Os02g0758000 | - | Detail |
| CX2g020363 | 2:29,219,292-29,225,826 | + | C1H2g13642 | C2H2g06385 | LOC_Os02g52160 | Os02g0758100 | - | Detail |
| CX2g019906 | 2:29,228,117-29,228,674 | - | - | C2H2g18730 | LOC_Os02g52170 | Os02g0758200 | - | Detail |
| CX2g023225 | 2:29,235,158-29,235,867 | + | C1H2g04566 | - | - | - | - | Detail |
| CX2g024112 | 2:29,237,339-29,237,894 | + | - | - | - | - | - | Detail |
| CX2g018879 | 2:29,240,898-29,241,703 | - | C1H2g09312 | C2H2g20568 | LOC_Os02g52180 | Os02g0758800 | - | Detail |
| CX2g019685 | 2:29,248,946-29,250,379 | - | C1H2g17070 | C2H2g15822 | LOC_Os02g52190 | Os02g0759000 | OsbHLH048 | Detail |
| CX2g024667 | 2:29,256,981-29,258,120 | + | C1H2g26668 | C2H2g05043 | LOC_Os02g52210 | Os02g0759400 | OsATL38 | Detail |
| CX2g021061 | 2:29,259,975-29,262,152 | + | C1H2g12934 | C2H2g25375 | - | - | - | Detail |
| CX2g023989 | 2:29,264,375-29,266,106 | + | C1H2g20944 | C2H2g17235 | LOC_Os02g52220 | Os02g0759500 | - | Detail |
| CX2g021430 | 2:29,269,593-29,269,808 | - | - | - | - | - | - | Detail |
| CX2g021992 | 2:29,273,419-29,276,081 | + | C1H2g18903 | C2H2g04549 | LOC_Os02g52230 | Os02g0759700 | - | Detail |
| CX2g023109 | 2:29,282,634-29,284,457 | - | - | C2H2g21014 | LOC_Os02g52250 | Os02g0759800 | - | Detail |
| CX2g019154 | 2:29,287,617-29,289,402 | + | C1H2g07998 | C2H2g25872 | LOC_Os02g52260 | Os02g0759900 | - | Detail |
| CX2g024435 | 2:29,290,380-29,292,184 | - | C1H2g13404 | C2H2g05401 | LOC_Os02g52270 | Os02g0760000 | - | Detail |
| CX2g021307 | 2:29,295,568-29,304,593 | + | C1H2g19953 | C2H2g07649 | LOC_Os02g52280 | Os02g0760200 | - | Detail |
| CX2g021362 | 2:29,305,962-29,307,890 | - | C1H2g28015 | C2H2g26428 | LOC_Os02g52290 | Os02g0760300 | OsFKBP12 | Detail |