| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g26133 | 3:3,546,686-3,547,895 | - | C1H3g27650 | CX3g029291 | LOC_Os03g08090 | Os03g0178300 | - | Detail |
| C2H3g08383 | 3:3,548,951-3,551,815 | - | C1H3g28165 | CX3g026682 | LOC_Os03g08100 | Os03g0178400 | - | Detail |
| C2H3g20309 | 3:3,553,463-3,558,745 | - | C1H3g16865 | CX3g026682 | LOC_Os03g08110 | Os03g0178500 | - | Detail |
| C2H3g17693 | 3:3,563,244-3,564,360 | + | - | - | - | - | - | Detail |
| C2H3g04420 | 3:3,564,723-3,571,308 | + | C1H3g20528 | CX3g027590 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| C2H3g12070 | 3:3,571,631-3,572,308 | + | C1H3g07823 | CX3g025130 | LOC_Os03g08150 | Os03g0179100 | - | Detail |
| C2H3g20817 | 3:3,573,932-3,574,333 | + | C1H3g18493 | CX3g029368 | LOC_Os03g07750 | Os03g0179200 | - | Detail |
| C2H3g13195 | 3:3,574,344-3,575,733 | + | C1H3g14467 | CX3g029368 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| C2H3g08147 | 3:3,583,061-3,588,133 | + | C1H3g20366 | CX3g028669 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| C2H3g15441 | 3:3,591,265-3,592,090 | - | C1H3g12127 | CX3g028526 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| C2H3g12971 | 3:3,595,768-3,602,195 | + | C1H3g24405 | CX3g028986 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| C2H3g00189 | 3:3,603,042-3,604,961 | - | C1H3g02343 | CX3g028266 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| C2H3g00572 | 3:3,608,756-3,609,181 | - | C1H3g14063 | CX3g030311 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| C2H3g21163 | 3:3,611,996-3,618,782 | + | C1H3g29143 | CX3g029641 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| C2H3g26539 | 3:3,619,094-3,621,529 | - | C1H3g14724 | CX3g028474 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| C2H3g28919 | 3:3,624,791-3,625,757 | + | C1H3g22681 | CX3g030332 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| C2H3g14443 | 3:3,625,938-3,631,098 | - | C1H3g16812 | - | - | - | - | Detail |
| C2H3g02101 | 3:3,635,627-3,636,163 | - | C1H3g29454 | CX3g028990 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| C2H3g09847 | 3:3,642,120-3,643,481 | + | C1H3g20655 | CX3g028324 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| C2H3g19227 | 3:3,650,465-3,651,049 | + | C1H3g10433 | CX3g026192 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020151 | 2:28,857,798-28,868,968 | - | C1H2g13604 | C2H2g05153 | LOC_Os02g51430 | Os02g0749500 | - | Detail |
| CX2g024014 | 2:28,872,221-28,874,368 | - | C1H2g12915 | C2H2g12052 | LOC_Os02g51440 | Os02g0749700 | OsLAC10 | Detail |
| CX2g021687 | 2:28,877,351-28,880,826 | + | C1H2g04161 | C2H2g16243 | LOC_Os02g51460 | Os02g0749800 | - | Detail |
| CX2g022869 | 2:28,883,126-28,883,857 | + | C1H2g29493 | C2H2g18210 | LOC_Os02g51470 | Os02g0750100 | - | Detail |
| CX2g023867 | 2:28,885,804-28,887,619 | + | C1H2g27058 | C2H2g20576 | LOC_Os02g51480 | Os02g0750400 | - | Detail |
| CX2g024878 | 2:28,888,554-28,890,277 | - | C1H2g09736 | C2H2g09023 | LOC_Os02g51490 | Os02g0750500 | - | Detail |
| CX2g020773 | 2:28,891,679-28,894,677 | - | C1H2g09736 | C2H2g09023 | LOC_Os02g51500 | Os02g0750600 | - | Detail |
| CX2g021234 | 2:28,903,914-28,904,366 | + | C1H2g05316 | C2H2g29295 | LOC_Os02g51510 | Os02g0750800 | - | Detail |
| CX2g019178 | 2:28,911,234-28,911,524 | + | C1H2g12338 | C2H2g18252 | LOC_Os02g51510 | Os02g0750800 | - | Detail |
| CX2g021459 | 2:28,915,754-28,916,686 | + | C1H2g20477 | C2H2g00480 | LOC_Os02g51540 | Os02g0751100 | - | Detail |
| CX2g020708 | 2:28,918,256-28,919,948 | - | C1H2g10352 | C2H2g12921 | LOC_Os02g46920 | Os02g0583500 | - | Detail |
| CX2g021934 | 2:28,920,870-28,925,109 | + | C1H2g20477 | C2H2g00480 | LOC_Os02g51540 | Os02g0751100 | - | Detail |
| CX2g023217 | 2:28,925,720-28,926,580 | + | C1H2g11542 | C2H2g18102 | - | Os02g0530100 | - | Detail |
| CX2g024689 | 2:28,931,487-28,932,811 | + | C1H2g23507 | C2H2g27297 | LOC_Os02g51550 | Os02g0751300 | - | Detail |
| CX2g021557 | 2:28,936,890-28,938,608 | - | - | - | LOC_Os02g54430 | - | - | Detail |
| CX2g022461 | 2:28,939,138-28,941,103 | - | C1H2g14472 | C2H2g09668 | LOC_Os02g54440 | Os02g0785600 | - | Detail |
| CX2g023575 | 2:28,944,630-28,945,971 | + | C1H2g10225 | C2H2g05502 | LOC_Os02g51570 | Os02g0751600 | - | Detail |
| CX2g023297 | 2:28,949,467-28,951,512 | + | C1H2g09134 | C2H2g01740 | LOC_Os02g51590 | Os02g0751800 | - | Detail |
| CX2g019962 | 2:28,952,726-28,955,550 | + | C1H2g31734 | C2H2g28626 | LOC_Os02g51600 | Os02g0751900 | - | Detail |
| CX2g021849 | 2:28,956,229-28,958,331 | - | C1H2g23156 | C2H2g07369 | LOC_Os02g51610 | Os02g0752000 | OsSec14-10 | Detail |