| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19937 | 4:5,291,901-5,292,961 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C1H4g07183 | 4:5,314,463-5,317,161 | - | C2H4g17260 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C1H4g18138 | 4:5,360,316-5,361,260 | + | C2H4g18642 | - | LOC_Os04g12060 | Os04g0197100 | - | Detail |
| C1H4g08988 | 4:5,365,722-5,370,854 | + | C2H4g00649 | CX4g035840 | LOC_Os04g12080 | Os04g0197200 | - | Detail |
| C1H4g25771 | 4:5,383,678-5,385,078 | - | C2H4g18722 | CX4g031765 | - | Os04g0197500 | - | Detail |
| C1H4g21757 | 4:5,393,908-5,398,869 | - | C2H4g14359 | CX1g000225 | - | Os04g0226400 | - | Detail |
| C1H4g22550 | 4:5,400,219-5,400,623 | + | - | - | - | - | - | Detail |
| C1H4g27102 | 4:5,441,945-5,450,377 | + | C2H4g15606 | CX4g035107 | LOC_Os04g12140 | Os04g0198733 | - | Detail |
| C1H4g06363 | 4:5,465,567-5,467,925 | - | - | - | - | - | - | Detail |
| C1H4g17776 | 4:5,469,221-5,470,399 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g14073 | 4:5,504,041-5,505,003 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g12642 | 4:5,563,624-5,567,254 | + | C2H4g11156 | CX4g034543 | - | Os09g0124200 | - | Detail |
| C1H4g15169 | 4:5,636,019-5,638,800 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g14978 | 4:5,644,403-5,645,228 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g16267 | 4:5,768,059-5,771,751 | - | C2H4g18135 | CX4g031446 | LOC_Os04g12460 | Os04g0201000 | - | Detail |
| C1H4g16105 | 4:5,789,191-5,795,814 | - | C2H4g10504 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C1H4g17374 | 4:5,823,492-5,834,769 | - | C2H4g26946 | CX4g033852 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| C1H4g14971 | 4:5,847,100-5,850,704 | - | C2H4g03852 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C1H4g07233 | 4:5,851,032-5,851,822 | + | - | - | - | - | - | Detail |
| C1H4g17048 | 4:5,863,850-5,866,285 | - | C2H4g12193 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020151 | 2:28,857,798-28,868,968 | - | C1H2g13604 | C2H2g05153 | LOC_Os02g51430 | Os02g0749500 | - | Detail |
| CX2g024014 | 2:28,872,221-28,874,368 | - | C1H2g12915 | C2H2g12052 | LOC_Os02g51440 | Os02g0749700 | OsLAC10 | Detail |
| CX2g021687 | 2:28,877,351-28,880,826 | + | C1H2g04161 | C2H2g16243 | LOC_Os02g51460 | Os02g0749800 | - | Detail |
| CX2g022869 | 2:28,883,126-28,883,857 | + | C1H2g29493 | C2H2g18210 | LOC_Os02g51470 | Os02g0750100 | - | Detail |
| CX2g023867 | 2:28,885,804-28,887,619 | + | C1H2g27058 | C2H2g20576 | LOC_Os02g51480 | Os02g0750400 | - | Detail |
| CX2g024878 | 2:28,888,554-28,890,277 | - | C1H2g09736 | C2H2g09023 | LOC_Os02g51490 | Os02g0750500 | - | Detail |
| CX2g020773 | 2:28,891,679-28,894,677 | - | C1H2g09736 | C2H2g09023 | LOC_Os02g51500 | Os02g0750600 | - | Detail |
| CX2g021234 | 2:28,903,914-28,904,366 | + | C1H2g05316 | C2H2g29295 | LOC_Os02g51510 | Os02g0750800 | - | Detail |
| CX2g019178 | 2:28,911,234-28,911,524 | + | C1H2g12338 | C2H2g18252 | LOC_Os02g51510 | Os02g0750800 | - | Detail |
| CX2g021459 | 2:28,915,754-28,916,686 | + | C1H2g20477 | C2H2g00480 | LOC_Os02g51540 | Os02g0751100 | - | Detail |
| CX2g020708 | 2:28,918,256-28,919,948 | - | C1H2g10352 | C2H2g12921 | LOC_Os02g46920 | Os02g0583500 | - | Detail |
| CX2g021934 | 2:28,920,870-28,925,109 | + | C1H2g20477 | C2H2g00480 | LOC_Os02g51540 | Os02g0751100 | - | Detail |
| CX2g023217 | 2:28,925,720-28,926,580 | + | C1H2g11542 | C2H2g18102 | - | Os02g0530100 | - | Detail |
| CX2g024689 | 2:28,931,487-28,932,811 | + | C1H2g23507 | C2H2g27297 | LOC_Os02g51550 | Os02g0751300 | - | Detail |
| CX2g021557 | 2:28,936,890-28,938,608 | - | - | - | LOC_Os02g54430 | - | - | Detail |
| CX2g022461 | 2:28,939,138-28,941,103 | - | C1H2g14472 | C2H2g09668 | LOC_Os02g54440 | Os02g0785600 | - | Detail |
| CX2g023575 | 2:28,944,630-28,945,971 | + | C1H2g10225 | C2H2g05502 | LOC_Os02g51570 | Os02g0751600 | - | Detail |
| CX2g023297 | 2:28,949,467-28,951,512 | + | C1H2g09134 | C2H2g01740 | LOC_Os02g51590 | Os02g0751800 | - | Detail |
| CX2g019962 | 2:28,952,726-28,955,550 | + | C1H2g31734 | C2H2g28626 | LOC_Os02g51600 | Os02g0751900 | - | Detail |
| CX2g021849 | 2:28,956,229-28,958,331 | - | C1H2g23156 | C2H2g07369 | LOC_Os02g51610 | Os02g0752000 | OsSec14-10 | Detail |