| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09688 | 3:3,191,401-3,193,017 | - | C1H3g04648 | CX3g027461 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| C2H3g10633 | 3:3,194,261-3,194,461 | + | C1H3g06973 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g26226 | 3:3,194,544-3,196,076 | + | C1H3g26589 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g29541 | 3:3,197,024-3,200,400 | + | C1H3g22339 | CX3g029329 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| C2H3g19913 | 3:3,201,036-3,204,268 | - | C1H3g05071 | CX3g026826 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| C2H3g06080 | 3:3,209,799-3,218,697 | + | C1H3g30733 | CX3g027561 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| C2H3g03131 | 3:3,213,087-3,213,844 | - | C1H3g17744 | CX3g029153 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| C2H3g15611 | 3:3,224,007-3,226,727 | + | C1H3g30713 | CX3g029943 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| C2H3g04475 | 3:3,229,652-3,231,256 | - | C1H3g07573 | CX3g029455 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| C2H3g13284 | 3:3,232,972-3,235,178 | - | C1H3g28123 | CX3g026502 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| C2H3g19051 | 3:3,240,112-3,240,477 | - | C1H3g30140 | CX3g030142 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| C2H3g20350 | 3:3,243,795-3,247,329 | + | C1H3g19291 | CX3g026147 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| C2H3g22587 | 3:3,247,889-3,251,731 | - | C1H3g10171 | CX3g030033 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |
| C2H3g17639 | 3:3,256,533-3,257,090 | - | C1H3g24740 | CX3g029150 | LOC_Os03g07440 | Os03g0170500 | - | Detail |
| C2H3g04350 | 3:3,263,703-3,266,489 | - | C1H3g30202 | CX3g026337 | LOC_Os03g07450 | Os03g0170600 | - | Detail |
| C2H3g02647 | 3:3,273,413-3,274,387 | + | C1H3g13830 | CX3g025444 | LOC_Os03g07470 | Os03g0170800 | - | Detail |
| C2H3g25317 | 3:3,276,597-3,282,402 | - | C1H3g13288 | CX3g025078 | LOC_Os03g07480 | Os03g0170900 | - | Detail |
| C2H3g26574 | 3:3,285,739-3,286,096 | + | - | - | - | Os11g0146950 | - | Detail |
| C2H3g08560 | 3:3,293,380-3,294,041 | - | C1H3g19778 | CX3g027135 | LOC_Os03g07510 | Os03g0171300 | PGL1, ILI6 | Detail |
| C2H3g08984 | 3:3,311,401-3,312,696 | + | C1H3g11183 | CX3g026056 | LOC_Os03g07530 | Os03g0171600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024083 | 2:28,691,974-28,693,620 | + | C1H2g26267 | C2H2g19332 | LOC_Os02g51130 | Os02g0745400 | - | Detail |
| CX2g019686 | 2:28,695,352-28,701,797 | + | C1H2g29615 | C2H2g06018 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| CX2g024841 | 2:28,703,119-28,704,671 | + | C1H2g00830 | C2H2g18017 | LOC_Os02g51150 | Os02g0745700 | - | Detail |
| CX2g020073 | 2:28,705,938-28,709,625 | + | C1H2g30172 | C2H2g26607 | LOC_Os02g51160 | Os02g0745800 | - | Detail |
| CX2g023147 | 2:28,711,238-28,711,994 | - | - | C2H2g27567 | LOC_Os02g51170 | - | - | Detail |
| CX2g022616 | 2:28,713,434-28,716,139 | - | C1H2g23262 | C2H2g23677 | LOC_Os02g51180 | Os02g0746000 | CUL3A, OsCUL3a | Detail |
| CX2g019996 | 2:28,729,296-28,729,903 | + | - | - | - | - | - | Detail |
| CX2g021847 | 2:28,754,750-28,755,973 | + | C1H6g16379 | C2H2g14227 | LOC_Os02g51280 | Os02g0747400 | - | Detail |
| CX2g024649 | 2:28,774,401-28,776,372 | + | C1H2g09862 | C2H2g20238 | LOC_Os02g51290 | Os02g0747500 | - | Detail |
| CX2g020731 | 2:28,777,435-28,780,812 | - | C1H2g31845 | C2H2g08371 | LOC_Os02g51300 | Os02g0747600 | - | Detail |
| CX2g020483 | 2:28,788,224-28,788,717 | - | C1H2g24533 | C2H2g00887 | LOC_Os02g51320 | Os02g0747900 | ILI5, OsBUL1, PGL2 | Detail |
| CX2g019591 | 2:28,795,911-28,796,276 | + | - | - | - | - | - | Detail |
| CX2g019270 | 2:28,798,457-28,803,642 | - | C1H2g27272 | C2H2g18570 | LOC_Os02g51330 | Os02g0748100 | - | Detail |
| CX2g021584 | 2:28,807,929-28,808,729 | - | C1H2g12274 | C2H2g16535 | LOC_Os02g51350 | Os02g0748300 | - | Detail |
| CX2g024619 | 2:28,825,618-28,826,592 | + | - | - | - | Os06g0226083 | - | Detail |
| CX2g024543 | 2:28,827,274-28,840,772 | + | C1H2g22698 | C2H2g14137 | LOC_Os02g51400 | Os02g0749150 | - | Detail |
| CX2g021013 | 2:28,841,884-28,842,219 | - | - | - | - | Os02g0749200 | - | Detail |
| CX2g021190 | 2:28,842,369-28,842,704 | + | - | C2H2g26680 | - | Os02g0749250 | - | Detail |
| CX2g023763 | 2:28,849,988-28,852,409 | + | C1H2g05950 | C2H2g17894 | LOC_Os02g51410 | Os02g0749300 | OsSK1 | Detail |
| CX2g021245 | 2:28,854,698-28,855,452 | - | C1H2g31897 | C2H2g10488 | LOC_Os02g51420 | Os02g0749450 | - | Detail |