| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28047 | 9:13,630,615-13,630,965 | - | C2H9g27037 | CX9g055154 | - | - | - | Detail |
| C1H9g23735 | 9:13,632,400-13,633,425 | + | C2H9g09304 | CX9g056527 | LOC_Os09g27160 | Os09g0443800 | - | Detail |
| C1H9g31300 | 9:13,638,773-13,642,992 | + | C2H9g09327 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C1H9g01379 | 9:13,644,050-13,646,937 | + | C2H9g09327 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C1H9g03322 | 9:13,651,293-13,652,125 | + | C2H9g16614 | - | - | - | - | Detail |
| C1H9g17916 | 9:13,652,765-13,659,428 | - | C2H9g09141 | CX9g055460 | LOC_Os09g27210 | Os09g0444200 | - | Detail |
| C1H9g09508 | 9:13,664,418-13,668,291 | + | C2H9g02894 | CX9g057848 | LOC_Os09g27220 | Os09g0444500 | OsBRXL5 | Detail |
| C1H9g31426 | 9:13,672,354-13,673,602 | - | C2H9g30118 | CX9g055599 | LOC_Os09g27240 | Os09g0444700 | - | Detail |
| C1H9g07241 | 9:13,675,299-13,676,258 | - | C2H9g30118 | CX9g055599 | LOC_Os09g27250 | Os09g0444800 | - | Detail |
| C1H9g06596 | 9:13,682,134-13,683,090 | - | C2H9g30118 | CX9g055792 | LOC_Os09g27260 | Os09g0444900 | - | Detail |
| C1H9g26826 | 9:13,691,510-13,692,217 | - | - | CX9g057103 | LOC_Os09g35640 | - | - | Detail |
| C1H9g24730 | 9:13,700,307-13,701,275 | + | C2H8g08329 | CX9g057702 | LOC_Os09g27320 | Os09g0445500 | - | Detail |
| C1H9g02580 | 9:13,706,221-13,706,739 | + | - | CX9g057460 | LOC_Os09g27330 | Os09g0445600 | - | Detail |
| C1H9g09668 | 9:13,710,264-13,711,838 | + | - | CX9g055814 | LOC_Os09g27340 | Os09g0445700 | - | Detail |
| C1H9g21040 | 9:13,717,179-13,717,557 | - | C2H9g28364 | CX9g055484 | - | Os09g0446000 | - | Detail |
| C1H9g31748 | 9:13,725,281-13,727,902 | + | C2H9g18491 | CX9g057107 | LOC_Os09g27370 | Os09g0446200 | - | Detail |
| C1H9g06567 | 9:13,730,848-13,731,546 | + | - | CX9g058084 | LOC_Os09g27380 | Os09g0446275 | - | Detail |
| C1H9g05710 | 9:13,734,623-13,734,898 | - | C2H9g27667 | - | LOC_Os09g27400 | Os09g0446350 | - | Detail |
| C1H9g31448 | 9:13,739,552-13,739,824 | + | - | - | LOC_Os09g27410 | Os09g0446700 | - | Detail |
| C1H9g06655 | 9:13,740,952-13,745,169 | + | C2H9g19872 | CX9g055024 | LOC_Os09g27420 | Os09g0446800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021784 | 2:28,556,724-28,557,221 | - | C1H6g24258 | C2H2g30022 | LOC_Os02g50940 | Os02g0743200 | - | Detail |
| CX2g020591 | 2:28,571,050-28,573,505 | - | C1H2g16987 | C2H2g19696 | LOC_Os02g50960 | Os02g0743400 | OsPIN1b, REH1 | Detail |
| CX2g023148 | 2:28,582,577-28,590,328 | + | C1H2g30195 | C2H2g05951 | LOC_Os02g50970 | Os02g0743500 | DSM1 | Detail |
| CX2g020133 | 2:28,591,976-28,592,689 | + | C1H2g30021 | C2H2g06723 | LOC_Os02g50980 | Os02g0743600 | - | Detail |
| CX2g022084 | 2:28,598,557-28,600,129 | + | C1H2g25365 | C2H2g09821 | LOC_Os02g50990 | Os02g0743700 | - | Detail |
| CX2g021744 | 2:28,602,468-28,605,379 | - | C1H2g26688 | C2H2g07616 | LOC_Os02g51000 | Os02g0743800 | - | Detail |
| CX2g020534 | 2:28,606,839-28,607,536 | - | C1H2g19131 | C2H2g25853 | LOC_Os02g51010 | Os02g0743900 | CASP4, OsCASP4 | Detail |
| CX2g022263 | 2:28,609,981-28,611,059 | + | C1H2g30910 | C2H2g21289 | LOC_Os02g51020 | Os02g0744000 | - | Detail |
| CX2g019710 | 2:28,618,585-28,620,829 | + | C1H2g05493 | C2H2g00809 | LOC_Os02g51030 | Os02g0744100 | - | Detail |
| CX2g019913 | 2:28,628,632-28,628,817 | - | - | - | - | - | - | Detail |
| CX2g018985 | 2:28,629,317-28,629,493 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g024332 | 2:28,630,353-28,631,424 | + | C1H2g28698 | C2H2g22842 | LOC_Os02g51040 | Os02g0744200 | - | Detail |
| CX2g024594 | 2:28,636,002-28,639,597 | - | C1H2g29538 | C2H2g01303 | LOC_Os02g51060 | Os02g0744600 | OsCSLA6 | Detail |
| CX2g022323 | 2:28,642,258-28,646,450 | - | C1H2g23191 | C2H2g07487 | LOC_Os02g51070 | Os02g0744700 | OsSSII-2 | Detail |
| CX2g022360 | 2:28,653,952-28,656,084 | + | C1H2g05032 | C2H2g08168 | LOC_Os02g51080 | Os02g0744900 | LYL1, OsChl P, OsGGRI, OsGGR1 | Detail |
| CX2g024390 | 2:28,656,799-28,658,219 | - | C1H6g15439 | C2H6g28900 | LOC_Os02g51090 | - | - | Detail |
| CX2g022714 | 2:28,661,255-28,664,149 | - | C1H2g28990 | C2H2g17927 | LOC_Os02g51100 | Os02g0745000 | - | Detail |
| CX2g021804 | 2:28,671,853-28,674,954 | + | C1H2g29361 | C2H2g17969 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| CX2g021523 | 2:28,678,551-28,678,766 | - | - | - | LOC_Os02g51119 | Os02g0745200 | - | Detail |
| CX2g024809 | 2:28,686,082-28,688,247 | + | C1H2g22873 | C2H2g06955 | LOC_Os02g42970 | Os02g0745300 | - | Detail |