| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02008 | 3:26,182,013-26,183,143 | - | C1H3g04028 | CX3g026061 | LOC_Os03g50110 | Os03g0708800 | - | Detail |
| C2H3g01107 | 3:26,185,381-26,189,613 | + | C1H3g25650 | CX3g026724 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| C2H3g12581 | 3:26,191,414-26,193,120 | - | C1H3g26419 | CX3g026549 | - | Os03g0709000 | - | Detail |
| C2H3g23367 | 3:26,194,969-26,195,175 | - | C1H3g00554 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C2H3g12217 | 3:26,195,267-26,195,473 | - | C1H3g08833 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C2H3g17990 | 3:26,201,153-26,203,099 | - | C1H3g00862 | CX3g027687 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| C2H3g00532 | 3:26,209,333-26,211,854 | - | C1H12g23110 | - | - | - | - | Detail |
| C2H3g22762 | 3:26,225,661-26,226,970 | + | C1H3g26800 | CX3g031286 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| C2H3g19621 | 3:26,227,851-26,230,459 | - | C1H3g31046 | CX3g026541 | LOC_Os03g50220 | - | - | Detail |
| C2H3g18554 | 3:26,231,717-26,234,922 | - | C1H3g04126 | CX3g026477 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| C2H3g09223 | 3:26,235,915-26,237,007 | - | C1H3g07148 | CX3g026477 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| C2H3g20376 | 3:26,239,365-26,242,346 | + | C1H3g05875 | CX3g028078 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| C2H3g06541 | 3:26,246,057-26,247,590 | - | C1H3g17966 | CX3g029323 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| C2H3g00310 | 3:26,250,143-26,251,759 | - | C1H3g12018 | CX3g027946 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| C2H3g13816 | 3:26,259,380-26,263,162 | + | C1H3g30860 | CX3g029821 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| C2H3g13830 | 3:26,265,796-26,273,924 | + | C1H3g01378 | CX3g029660 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| C2H3g07676 | 3:26,279,870-26,282,288 | + | C1H3g31233 | CX3g028553 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| C2H3g02097 | 3:26,282,644-26,297,961 | - | C1H3g26509 | CX3g031158 | LOC_Os03g50320 | Os03g0711200 | - | Detail |
| C2H3g27257 | 3:26,299,995-26,307,777 | - | C1H3g08523 | CX3g026863 | LOC_Os03g50330 | Os03g0711300 | - | Detail |
| C2H3g20089 | 3:26,309,999-26,315,252 | - | C1H3g29848 | CX3g028922 | LOC_Os03g50340 | Os03g0711400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000002 | 1:11,810,974-11,813,202 | + | - | C2H5g07853 | LOC_Os01g26980 | - | - | Detail |
| CX1g005446 | 1:11,818,797-11,819,583 | + | - | - | - | - | - | Detail |
| CX1g002691 | 1:11,831,957-11,835,285 | - | C1H1g01015 | C2H1g05738 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| CX1g001953 | 1:11,859,778-11,860,026 | - | - | - | LOC_Os01g28650 | - | - | Detail |
| CX1g004157 | 1:11,861,540-11,861,770 | - | - | - | LOC_Os10g10938 | - | - | Detail |
| CX1g003905 | 1:11,984,516-11,986,627 | + | - | - | LOC_Os01g24080 | - | - | Detail |
| CX1g002136 | 1:11,994,354-11,994,620 | + | - | - | - | - | - | Detail |
| CX1g000334 | 1:12,031,175-12,031,354 | + | - | - | - | - | - | Detail |
| CX1g001163 | 1:12,034,821-12,035,057 | + | - | - | - | - | - | Detail |
| CX1g005016 | 1:12,058,329-12,059,509 | + | - | - | LOC_Os01g24350 | - | - | Detail |
| CX1g005432 | 1:12,059,961-12,060,158 | - | - | - | - | - | - | Detail |
| CX1g000874 | 1:12,095,095-12,095,388 | + | - | - | LOC_Os01g28970 | - | - | Detail |
| CX1g001264 | 1:12,127,887-12,128,123 | - | - | - | LOC_Os05g23310 | - | - | Detail |
| CX1g006162 | 1:12,179,700-12,180,029 | + | - | - | - | - | - | Detail |
| CX1g000519 | 1:12,202,243-12,202,512 | + | - | - | - | - | - | Detail |
| CX1g003274 | 1:12,234,333-12,236,284 | - | - | - | - | - | - | Detail |
| CX1g002107 | 1:12,273,762-12,275,844 | - | C1H1g10156 | - | - | - | - | Detail |
| CX1g001612 | 1:12,292,080-12,292,256 | + | - | - | - | - | - | Detail |
| CX1g005813 | 1:12,308,369-12,308,629 | - | - | - | - | - | - | Detail |
| CX1g005895 | 1:12,315,528-12,317,030 | + | C1H1g21970 | C2H1g05112 | LOC_Os01g24500 | Os01g0346250 | - | Detail |