| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00833 | 3:6,156,874-6,159,740 | - | C1H3g13331 | CX3g027611 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| C2H3g09594 | 3:6,162,907-6,164,923 | - | C1H3g17846 | CX3g030152 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| C2H3g04826 | 3:6,169,883-6,171,313 | - | C1H3g04613 | CX3g030910 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| C2H3g04774 | 3:6,176,440-6,180,711 | - | C1H3g30000 | CX3g029956 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| C2H3g26123 | 3:6,213,044-6,213,472 | + | C1H3g07150 | CX3g028212 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| C2H3g04799 | 3:6,217,496-6,217,914 | - | C1H3g22613 | CX3g028040 | - | Os02g0738300 | - | Detail |
| C2H3g26449 | 3:6,218,204-6,220,951 | + | C1H3g28102 | CX3g028651 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| C2H3g15250 | 3:6,226,447-6,227,826 | - | C1H3g02271 | CX3g031218 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |
| C2H3g13166 | 3:6,242,290-6,244,009 | - | C1H3g01497 | CX3g029569 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| C2H3g05297 | 3:6,245,343-6,249,107 | - | C1H3g06697 | CX3g027690 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| C2H3g03038 | 3:6,259,189-6,260,716 | + | C1H3g26874 | CX3g025391 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| C2H3g18690 | 3:6,262,896-6,263,675 | - | C1H3g16800 | CX3g030154 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| C2H3g14812 | 3:6,265,248-6,268,840 | - | C1H3g06079 | CX3g029185 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| C2H3g23005 | 3:6,272,046-6,275,587 | + | C1H3g06632 | CX3g028548 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| C2H3g09799 | 3:6,279,462-6,283,564 | + | C1H3g16553 | CX3g029407 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| C2H3g00329 | 3:6,284,070-6,297,053 | - | - | - | - | - | - | Detail |
| C2H3g17247 | 3:6,299,016-6,299,858 | - | C1H3g27731 | CX3g025432 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| C2H3g15076 | 3:6,302,555-6,307,791 | + | - | CX3g028989 | LOC_Os03g21310 | - | - | Detail |
| C2H3g00667 | 3:6,318,526-6,319,400 | + | C1H3g19664 | CX3g027207 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| C2H3g02090 | 3:6,321,649-6,322,638 | + | C1H3g02151 | CX3g030474 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000002 | 1:11,810,974-11,813,202 | + | - | C2H5g07853 | LOC_Os01g26980 | - | - | Detail |
| CX1g005446 | 1:11,818,797-11,819,583 | + | - | - | - | - | - | Detail |
| CX1g002691 | 1:11,831,957-11,835,285 | - | C1H1g01015 | C2H1g05738 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| CX1g001953 | 1:11,859,778-11,860,026 | - | - | - | LOC_Os01g28650 | - | - | Detail |
| CX1g004157 | 1:11,861,540-11,861,770 | - | - | - | LOC_Os10g10938 | - | - | Detail |
| CX1g003905 | 1:11,984,516-11,986,627 | + | - | - | LOC_Os01g24080 | - | - | Detail |
| CX1g002136 | 1:11,994,354-11,994,620 | + | - | - | - | - | - | Detail |
| CX1g000334 | 1:12,031,175-12,031,354 | + | - | - | - | - | - | Detail |
| CX1g001163 | 1:12,034,821-12,035,057 | + | - | - | - | - | - | Detail |
| CX1g005016 | 1:12,058,329-12,059,509 | + | - | - | LOC_Os01g24350 | - | - | Detail |
| CX1g005432 | 1:12,059,961-12,060,158 | - | - | - | - | - | - | Detail |
| CX1g000874 | 1:12,095,095-12,095,388 | + | - | - | LOC_Os01g28970 | - | - | Detail |
| CX1g001264 | 1:12,127,887-12,128,123 | - | - | - | LOC_Os05g23310 | - | - | Detail |
| CX1g006162 | 1:12,179,700-12,180,029 | + | - | - | - | - | - | Detail |
| CX1g000519 | 1:12,202,243-12,202,512 | + | - | - | - | - | - | Detail |
| CX1g003274 | 1:12,234,333-12,236,284 | - | - | - | - | - | - | Detail |
| CX1g002107 | 1:12,273,762-12,275,844 | - | C1H1g10156 | - | - | - | - | Detail |
| CX1g001612 | 1:12,292,080-12,292,256 | + | - | - | - | - | - | Detail |
| CX1g005813 | 1:12,308,369-12,308,629 | - | - | - | - | - | - | Detail |
| CX1g005895 | 1:12,315,528-12,317,030 | + | C1H1g21970 | C2H1g05112 | LOC_Os01g24500 | Os01g0346250 | - | Detail |