| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08572 | 4:29,855,577-29,857,642 | + | C1H4g24892 | CX4g035752 | LOC_Os04g57880 | Os04g0675400 | - | Detail |
| C2H4g03210 | 4:29,861,813-29,866,308 | - | C1H4g19584 | CX4g032155 | LOC_Os04g57890 | Os04g0675500 | - | Detail |
| C2H4g24087 | 4:29,868,732-29,870,351 | - | - | CX4g031866 | LOC_Os04g57900 | Os04g0675600 | - | Detail |
| C2H4g26109 | 4:29,871,167-29,873,030 | - | C1H4g03017 | CX4g033223 | LOC_Os04g57910 | Os04g0675700 | - | Detail |
| C2H4g00320 | 4:29,874,980-29,878,987 | - | C1H4g18368 | CX4g033223 | LOC_Os04g57920 | Os04g0675800 | - | Detail |
| C2H4g07538 | 4:29,879,468-29,880,875 | + | C1H4g11221 | CX4g035153 | LOC_Os04g57930 | Os04g0676100 | - | Detail |
| C2H4g16554 | 4:29,881,887-29,883,437 | - | - | CX4g033361 | LOC_Os04g57940 | Os04g0676200 | - | Detail |
| C2H4g21711 | 4:29,885,118-29,889,442 | + | C1H4g30601 | CX4g031832 | LOC_Os04g57950 | Os04g0676300 | OsDHODH | Detail |
| C2H4g21186 | 4:29,898,050-29,898,922 | + | C1H4g28865 | CX4g036554 | LOC_Os04g57970 | Os04g0676400 | - | Detail |
| C2H4g04552 | 4:29,899,350-29,901,923 | + | C1H4g28865 | - | - | - | - | Detail |
| C2H4g10791 | 4:29,904,046-29,908,373 | - | C1H4g01682 | CX4g035344 | LOC_Os04g58000 | Os04g0676600 | OsL1 | Detail |
| C2H4g20019 | 4:29,913,908-29,918,756 | - | C1H4g27509 | CX4g035344 | LOC_Os04g58010 | Os04g0676650 | OsLFL2 | Detail |
| C2H4g23091 | 4:29,921,299-29,924,954 | - | C1H4g18362 | CX4g033282 | LOC_Os04g58020 | Os04g0676700 | - | Detail |
| C2H4g01061 | 4:29,927,460-29,931,441 | + | C1H4g08360 | CX4g031920 | LOC_Os04g58060 | Os04g0677066 | OsPRMT6b | Detail |
| C2H4g04394 | 4:29,932,889-29,934,301 | - | - | CX4g034001 | LOC_Os04g58070 | Os04g0677100 | - | Detail |
| C2H4g10742 | 4:29,940,363-29,941,934 | + | - | CX4g034936 | LOC_Os04g58080 | Os04g0677200 | - | Detail |
| C2H4g20980 | 4:29,942,833-29,943,603 | - | - | CX4g033431 | LOC_Os04g58090 | Os04g0677300 | - | Detail |
| C2H4g13850 | 4:29,946,590-29,950,314 | - | C1H4g21826 | CX4g033098 | LOC_Os04g58100 | Os04g0677400 | - | Detail |
| C2H4g08366 | 4:29,951,080-29,954,713 | - | C1H4g16702 | CX4g036332 | LOC_Os04g58110 | Os04g0677500 | - | Detail |
| C2H4g27579 | 4:29,958,139-29,958,717 | + | - | CX4g033867 | LOC_Os04g58120 | Os04g0677600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023479 | 2:28,219,591-28,225,810 | + | C1H2g10005 | C2H2g04852 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| CX2g023200 | 2:28,226,208-28,226,465 | - | C1H2g07594 | C2H2g22765 | - | Os02g0736700 | - | Detail |
| CX2g022254 | 2:28,229,632-28,229,994 | - | - | C2H2g11611 | - | Os02g0736900 | - | Detail |
| CX2g022563 | 2:28,250,914-28,251,108 | + | C1H2g31655 | C2H2g19151 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| CX2g023707 | 2:28,254,575-28,255,939 | - | C1H2g22578 | C2H2g10969 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| CX2g024898 | 2:28,261,179-28,261,361 | - | - | - | - | - | - | Detail |
| CX2g021204 | 2:28,273,265-28,278,778 | + | C1H2g00500 | C2H2g16308 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| CX2g020936 | 2:28,287,936-28,291,324 | + | C1H2g09387 | C2H2g12754 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| CX2g019732 | 2:28,297,630-28,298,362 | + | - | - | LOC_Os02g50670 | Os07g0631500 | - | Detail |
| CX2g022539 | 2:28,300,105-28,309,550 | - | C1H2g28406 | C2H2g25440 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| CX2g024755 | 2:28,311,017-28,320,130 | + | C1H2g06055 | C2H2g10338 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| CX2g024527 | 2:28,320,421-28,324,471 | - | C1H2g22155 | C2H2g19070 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| CX2g023617 | 2:28,333,938-28,335,023 | - | C1H2g26267 | C2H2g12798 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| CX2g023255 | 2:28,344,985-28,348,399 | - | C1H2g19740 | C2H2g13279 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| CX2g021394 | 2:28,350,204-28,353,033 | - | C1H2g02446 | C2H2g20599 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| CX2g023514 | 2:28,356,867-28,359,897 | - | C1H2g01602 | C2H2g22496 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| CX2g021304 | 2:28,375,134-28,381,229 | - | C1H2g14498 | C2H2g07910 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| CX2g024066 | 2:28,382,004-28,383,439 | - | C1H2g26149 | C2H2g25866 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| CX2g023069 | 2:28,387,811-28,388,574 | + | C1H2g27425 | C2H2g26692 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| CX2g024544 | 2:28,394,651-28,397,408 | - | C1H2g04140 | C2H2g23006 | LOC_Os02g50710 | Os02g0740600 | - | Detail |