| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24180 | 4:21,494,006-21,497,139 | - | C1H4g26119 | CX4g035149 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C2H4g04320 | 4:21,498,233-21,501,341 | + | C1H2g29419 | CX4g034831 | LOC_Os04g42095 | Os04g0498600 | - | Detail |
| C2H4g02540 | 4:21,503,962-21,508,711 | - | C1H4g07127 | CX4g035609 | LOC_Os04g42100 | Os04g0498700 | - | Detail |
| C2H4g27959 | 4:21,511,136-21,514,806 | + | C1H4g28042 | CX4g036667 | LOC_Os04g42110 | Os04g0498800 | - | Detail |
| C2H4g04345 | 4:21,515,550-21,517,602 | - | C1H4g30393 | CX4g033443 | LOC_Os04g42120 | Os04g0498900 | - | Detail |
| C2H4g13494 | 4:21,531,620-21,534,120 | + | C1H4g24350 | CX4g032632 | LOC_Os04g42130 | Os04g0499100 | - | Detail |
| C2H4g25390 | 4:21,534,494-21,535,945 | - | C1H4g04057 | CX4g031891 | LOC_Os04g42134 | Os04g0499200 | - | Detail |
| C2H4g20172 | 4:21,536,933-21,543,015 | - | C1H4g00134 | CX4g035111 | LOC_Os04g42140 | Os04g0499300 | RYMV1 | Detail |
| C2H4g26319 | 4:21,546,603-21,547,193 | - | - | - | - | - | - | Detail |
| C2H4g02845 | 4:21,570,670-21,571,026 | + | C1H4g24364 | CX4g035561 | LOC_Os04g42160 | - | - | Detail |
| C2H4g15895 | 4:21,571,424-21,572,343 | + | C1H4g24364 | CX4g035561 | - | - | - | Detail |
| C2H4g09516 | 4:21,575,819-21,576,580 | - | C1H4g04561 | CX4g035616 | LOC_Os04g42200 | Os04g0500200 | - | Detail |
| C2H4g21155 | 4:21,577,679-21,578,130 | + | C1H4g07100 | CX4g034798 | LOC_Os04g42210 | Os04g0500300 | - | Detail |
| C2H4g14569 | 4:21,580,254-21,580,985 | + | C1H4g19980 | CX4g032419 | LOC_Os04g42220 | Os04g0500400 | - | Detail |
| C2H4g30419 | 4:21,581,483-21,582,157 | - | - | CX4g032000 | LOC_Os04g42230 | - | - | Detail |
| C2H4g14624 | 4:21,592,733-21,598,425 | + | C1H4g27904 | CX4g033698 | LOC_Os04g42250 | Os04g0500700 | - | Detail |
| C2H4g24343 | 4:21,602,481-21,605,546 | + | C1H4g03919 | CX4g034952 | LOC_Os04g42260 | Os04g0500900 | - | Detail |
| C2H4g19796 | 4:21,607,220-21,608,949 | - | C1H4g10006 | CX4g034970 | LOC_Os04g42270 | Os04g0501000 | - | Detail |
| C2H4g05530 | 4:21,609,646-21,612,989 | + | C1H4g23951 | CX4g033035 | LOC_Os04g42280 | Os04g0501100 | - | Detail |
| C2H4g16771 | 4:21,614,911-21,618,174 | + | C1H4g25280 | CX4g036023 | LOC_Os04g42290 | Os04g0501200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023479 | 2:28,219,591-28,225,810 | + | C1H2g10005 | C2H2g04852 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| CX2g023200 | 2:28,226,208-28,226,465 | - | C1H2g07594 | C2H2g22765 | - | Os02g0736700 | - | Detail |
| CX2g022254 | 2:28,229,632-28,229,994 | - | - | C2H2g11611 | - | Os02g0736900 | - | Detail |
| CX2g022563 | 2:28,250,914-28,251,108 | + | C1H2g31655 | C2H2g19151 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| CX2g023707 | 2:28,254,575-28,255,939 | - | C1H2g22578 | C2H2g10969 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| CX2g024898 | 2:28,261,179-28,261,361 | - | - | - | - | - | - | Detail |
| CX2g021204 | 2:28,273,265-28,278,778 | + | C1H2g00500 | C2H2g16308 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| CX2g020936 | 2:28,287,936-28,291,324 | + | C1H2g09387 | C2H2g12754 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| CX2g019732 | 2:28,297,630-28,298,362 | + | - | - | LOC_Os02g50670 | Os07g0631500 | - | Detail |
| CX2g022539 | 2:28,300,105-28,309,550 | - | C1H2g28406 | C2H2g25440 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| CX2g024755 | 2:28,311,017-28,320,130 | + | C1H2g06055 | C2H2g10338 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| CX2g024527 | 2:28,320,421-28,324,471 | - | C1H2g22155 | C2H2g19070 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| CX2g023617 | 2:28,333,938-28,335,023 | - | C1H2g26267 | C2H2g12798 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| CX2g023255 | 2:28,344,985-28,348,399 | - | C1H2g19740 | C2H2g13279 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| CX2g021394 | 2:28,350,204-28,353,033 | - | C1H2g02446 | C2H2g20599 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| CX2g023514 | 2:28,356,867-28,359,897 | - | C1H2g01602 | C2H2g22496 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| CX2g021304 | 2:28,375,134-28,381,229 | - | C1H2g14498 | C2H2g07910 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| CX2g024066 | 2:28,382,004-28,383,439 | - | C1H2g26149 | C2H2g25866 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| CX2g023069 | 2:28,387,811-28,388,574 | + | C1H2g27425 | C2H2g26692 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| CX2g024544 | 2:28,394,651-28,397,408 | - | C1H2g04140 | C2H2g23006 | LOC_Os02g50710 | Os02g0740600 | - | Detail |