| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g09534 | 2:4,705,051-4,712,201 | - | C1H2g04685 | CX2g023359 | LOC_Os02g09930 | Os02g0192500 | - | Detail |
| C2H2g26045 | 2:4,722,105-4,727,443 | + | C1H2g04517 | CX2g020801 | LOC_Os02g09960 | Os02g0681700 | - | Detail |
| C2H2g08116 | 2:4,746,584-4,748,834 | - | C1H2g13857 | CX2g024515 | LOC_Os02g10000 | Os02g0692700 | - | Detail |
| C2H2g15037 | 2:4,753,830-4,756,683 | + | C1H2g07967 | CX2g019793 | LOC_Os02g10020 | Os02g0193600 | - | Detail |
| C2H2g08713 | 2:4,763,293-4,771,665 | - | C1H2g07472 | CX2g019209 | LOC_Os02g10040 | Os02g0193800 | - | Detail |
| C2H2g17619 | 2:4,772,127-4,774,194 | + | C1H2g02212 | CX2g024742 | LOC_Os02g10050 | Os02g0193900 | - | Detail |
| C2H2g06708 | 2:4,778,391-4,782,338 | + | C1H2g15037 | CX2g019815 | LOC_Os02g10060 | Os02g0194000 | - | Detail |
| C2H2g06175 | 2:4,783,216-4,789,992 | - | C1H2g31151 | CX2g018929 | LOC_Os02g10070 | Os02g0194100 | OsCS1 | Detail |
| C2H2g19581 | 2:4,791,639-4,794,280 | + | C1H2g01680 | CX2g024726 | LOC_Os02g10080 | Os02g0194200 | - | Detail |
| C2H2g19822 | 2:4,795,064-4,798,778 | - | C1H2g25469 | CX2g023840 | LOC_Os02g10090 | Os02g0194300 | - | Detail |
| C2H2g11592 | 2:4,801,034-4,803,265 | - | C1H2g00379 | CX2g023970 | LOC_Os02g10100 | Os02g0194400 | - | Detail |
| C2H2g12618 | 2:4,807,292-4,807,600 | - | C1H2g00379 | CX2g023970 | LOC_Os02g10100 | - | - | Detail |
| C2H2g21295 | 2:4,810,033-4,815,900 | + | C1H2g24030 | CX2g022923 | LOC_Os02g10110 | Os02g0194600 | - | Detail |
| C2H2g02450 | 2:4,816,429-4,821,921 | - | C1H2g31130 | CX2g021531 | LOC_Os02g10120 | Os02g0194700 | - | Detail |
| C2H2g01869 | 2:4,833,794-4,842,426 | - | C1H2g23844 | CX2g020333 | LOC_Os02g10130 | Os02g0194800 | - | Detail |
| C2H2g10539 | 2:4,859,708-4,868,924 | + | C1H2g21964 | CX2g020853 | LOC_Os02g10150 | Os02g0194900 | - | Detail |
| C2H2g06207 | 2:4,868,564-4,874,409 | - | C1H2g27867 | CX2g021612 | LOC_Os02g10160 | Os02g0195000 | - | Detail |
| C2H2g15427 | 2:4,875,268-4,879,877 | - | C1H2g21804 | CX2g020299 | LOC_Os02g10180 | Os02g0195300 | - | Detail |
| C2H2g06134 | 2:4,881,747-4,887,285 | + | C1H2g31295 | CX2g021996 | LOC_Os02g10190 | Os02g0195500 | - | Detail |
| C2H2g29992 | 2:4,888,371-4,890,241 | - | C1H2g07214 | CX2g019506 | LOC_Os02g10200 | Os02g0195600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023479 | 2:28,219,591-28,225,810 | + | C1H2g10005 | C2H2g04852 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| CX2g023200 | 2:28,226,208-28,226,465 | - | C1H2g07594 | C2H2g22765 | - | Os02g0736700 | - | Detail |
| CX2g022254 | 2:28,229,632-28,229,994 | - | - | C2H2g11611 | - | Os02g0736900 | - | Detail |
| CX2g022563 | 2:28,250,914-28,251,108 | + | C1H2g31655 | C2H2g19151 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| CX2g023707 | 2:28,254,575-28,255,939 | - | C1H2g22578 | C2H2g10969 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| CX2g024898 | 2:28,261,179-28,261,361 | - | - | - | - | - | - | Detail |
| CX2g021204 | 2:28,273,265-28,278,778 | + | C1H2g00500 | C2H2g16308 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| CX2g020936 | 2:28,287,936-28,291,324 | + | C1H2g09387 | C2H2g12754 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| CX2g019732 | 2:28,297,630-28,298,362 | + | - | - | LOC_Os02g50670 | Os07g0631500 | - | Detail |
| CX2g022539 | 2:28,300,105-28,309,550 | - | C1H2g28406 | C2H2g25440 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| CX2g024755 | 2:28,311,017-28,320,130 | + | C1H2g06055 | C2H2g10338 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| CX2g024527 | 2:28,320,421-28,324,471 | - | C1H2g22155 | C2H2g19070 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| CX2g023617 | 2:28,333,938-28,335,023 | - | C1H2g26267 | C2H2g12798 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| CX2g023255 | 2:28,344,985-28,348,399 | - | C1H2g19740 | C2H2g13279 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| CX2g021394 | 2:28,350,204-28,353,033 | - | C1H2g02446 | C2H2g20599 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| CX2g023514 | 2:28,356,867-28,359,897 | - | C1H2g01602 | C2H2g22496 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| CX2g021304 | 2:28,375,134-28,381,229 | - | C1H2g14498 | C2H2g07910 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| CX2g024066 | 2:28,382,004-28,383,439 | - | C1H2g26149 | C2H2g25866 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| CX2g023069 | 2:28,387,811-28,388,574 | + | C1H2g27425 | C2H2g26692 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| CX2g024544 | 2:28,394,651-28,397,408 | - | C1H2g04140 | C2H2g23006 | LOC_Os02g50710 | Os02g0740600 | - | Detail |