| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g01856 | 3:1,832,864-1,835,212 | - | C2H3g17961 | CX3g031134 | LOC_Os03g04390 | Os03g0136700 | OsPGL3A | Detail |
| C1H3g19390 | 3:1,836,280-1,839,193 | - | C2H3g24395 | CX3g026091 | LOC_Os03g04400 | Os03g0136800 | - | Detail |
| C1H3g26141 | 3:1,840,377-1,847,342 | - | C2H3g13274 | CX3g026194 | LOC_Os03g04410 | Os03g0136900 | - | Detail |
| C1H3g09324 | 3:1,862,774-1,866,202 | + | C2H3g10382 | CX3g025161 | LOC_Os03g04430 | Os03g0137200 | - | Detail |
| C1H3g24578 | 3:1,867,229-1,870,389 | - | C2H3g08269 | CX3g030835 | LOC_Os03g04440 | Os03g0137300 | - | Detail |
| C1H3g23115 | 3:1,872,827-1,880,719 | + | C2H3g22036 | CX3g030190 | LOC_Os03g04450 | Os03g0137400 | - | Detail |
| C1H3g17292 | 3:1,881,481-1,883,028 | + | C2H3g01834 | CX3g030394 | LOC_Os03g04470 | Os03g0137600 | - | Detail |
| C1H3g01548 | 3:1,884,268-1,885,993 | - | C2H3g03162 | CX3g026460 | LOC_Os03g04480 | Os03g0137700 | - | Detail |
| C1H3g28742 | 3:1,896,875-1,897,595 | + | C2H3g00922 | CX3g029178 | LOC_Os03g04490 | Os03g0137800 | KRP5 | Detail |
| C1H3g12595 | 3:1,906,831-1,911,279 | + | C2H3g19333 | CX3g025982 | LOC_Os03g04500 | Os03g0138000 | - | Detail |
| C1H3g07979 | 3:1,912,717-1,921,984 | - | C2H3g17338 | - | - | - | - | Detail |
| C1H3g03175 | 3:1,924,943-1,926,511 | + | C2H3g18481 | CX3g028238 | LOC_Os03g04530 | Os03g0138200 | - | Detail |
| C1H3g14282 | 3:1,929,358-1,929,630 | + | C2H3g15460 | CX3g028187 | LOC_Os03g04545 | Os03g0138400 | - | Detail |
| C1H3g10085 | 3:1,934,900-1,936,414 | + | C2H3g21651 | CX3g026784 | LOC_Os03g04550 | Os03g0138500 | - | Detail |
| C1H3g00368 | 3:1,937,096-1,940,683 | - | C2H3g00575 | CX3g030039 | LOC_Os03g04560 | Os03g0138600 | - | Detail |
| C1H3g01644 | 3:1,943,352-1,947,970 | - | C2H3g22416 | CX3g028744 | LOC_Os03g04570 | Os03g0138700 | OsPTR1 | Detail |
| C1H3g14228 | 3:1,950,726-1,951,709 | + | C2H3g08919 | CX3g028323 | LOC_Os03g04580 | Os03g0138900 | - | Detail |
| C1H3g13763 | 3:1,953,454-1,956,207 | + | C2H3g29903 | CX3g027627 | LOC_Os03g04590 | Os03g0139100 | - | Detail |
| C1H3g21758 | 3:1,956,358-1,961,206 | - | C2H3g28589 | CX3g030974 | LOC_Os03g04600 | Os03g0139200 | - | Detail |
| C1H3g05378 | 3:1,965,110-1,966,075 | + | C2H3g22571 | CX3g025022 | LOC_Os03g04610 | Os03g0139400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023479 | 2:28,219,591-28,225,810 | + | C1H2g10005 | C2H2g04852 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| CX2g023200 | 2:28,226,208-28,226,465 | - | C1H2g07594 | C2H2g22765 | - | Os02g0736700 | - | Detail |
| CX2g022254 | 2:28,229,632-28,229,994 | - | - | C2H2g11611 | - | Os02g0736900 | - | Detail |
| CX2g022563 | 2:28,250,914-28,251,108 | + | C1H2g31655 | C2H2g19151 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| CX2g023707 | 2:28,254,575-28,255,939 | - | C1H2g22578 | C2H2g10969 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| CX2g024898 | 2:28,261,179-28,261,361 | - | - | - | - | - | - | Detail |
| CX2g021204 | 2:28,273,265-28,278,778 | + | C1H2g00500 | C2H2g16308 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| CX2g020936 | 2:28,287,936-28,291,324 | + | C1H2g09387 | C2H2g12754 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| CX2g019732 | 2:28,297,630-28,298,362 | + | - | - | LOC_Os02g50670 | Os07g0631500 | - | Detail |
| CX2g022539 | 2:28,300,105-28,309,550 | - | C1H2g28406 | C2H2g25440 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| CX2g024755 | 2:28,311,017-28,320,130 | + | C1H2g06055 | C2H2g10338 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| CX2g024527 | 2:28,320,421-28,324,471 | - | C1H2g22155 | C2H2g19070 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| CX2g023617 | 2:28,333,938-28,335,023 | - | C1H2g26267 | C2H2g12798 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| CX2g023255 | 2:28,344,985-28,348,399 | - | C1H2g19740 | C2H2g13279 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| CX2g021394 | 2:28,350,204-28,353,033 | - | C1H2g02446 | C2H2g20599 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| CX2g023514 | 2:28,356,867-28,359,897 | - | C1H2g01602 | C2H2g22496 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| CX2g021304 | 2:28,375,134-28,381,229 | - | C1H2g14498 | C2H2g07910 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| CX2g024066 | 2:28,382,004-28,383,439 | - | C1H2g26149 | C2H2g25866 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| CX2g023069 | 2:28,387,811-28,388,574 | + | C1H2g27425 | C2H2g26692 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| CX2g024544 | 2:28,394,651-28,397,408 | - | C1H2g04140 | C2H2g23006 | LOC_Os02g50710 | Os02g0740600 | - | Detail |