| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13150 | 1:19,719,183-19,724,304 | - | C2H1g07054 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C1H1g28155 | 1:19,742,455-19,742,760 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C1H1g07908 | 1:19,752,564-19,757,343 | + | C2H1g24859 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C1H1g29752 | 1:19,758,224-19,764,239 | + | C2H1g10171 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C1H1g31440 | 1:19,764,424-19,766,997 | - | C2H1g01556 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C1H1g24447 | 1:19,774,505-19,775,401 | - | C2H1g15345 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C1H1g25426 | 1:19,804,916-19,813,361 | + | C2H1g03847 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C1H1g10200 | 1:19,824,319-19,828,019 | + | C2H1g02368 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C1H1g31451 | 1:19,845,647-19,862,874 | - | C2H1g09392 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C1H1g30977 | 1:19,904,946-19,907,110 | + | C2H1g15351 | - | LOC_Os01g39430 | Os01g0576100 | Rb1 | Detail |
| C1H1g22058 | 1:19,919,583-19,923,825 | + | C2H1g23511 | CX1g004267 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| C1H1g30169 | 1:20,001,847-20,002,962 | + | C2H1g23392 | CX1g004267 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C1H1g25385 | 1:20,016,397-20,019,710 | - | C2H1g00498 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C1H1g03498 | 1:20,034,003-20,038,602 | - | C2H1g04424 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C1H1g20612 | 1:20,043,128-20,049,701 | - | C2H1g11258 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C1H1g26503 | 1:20,059,781-20,060,829 | + | C2H1g04472 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C1H1g02081 | 1:20,062,715-20,064,890 | + | C2H1g18851 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C1H1g21250 | 1:20,113,505-20,116,419 | + | C2H1g09591 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C1H1g07602 | 1:20,121,740-20,124,076 | + | C2H1g01010 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C1H1g16386 | 1:20,124,940-20,128,086 | - | C2H1g23706 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023041 | 2:28,054,354-28,054,884 | - | C1H2g28250 | C2H2g09796 | LOC_Os02g50060 | Os02g0733500 | - | Detail |
| CX2g024530 | 2:28,060,888-28,063,366 | + | C1H2g25545 | C2H2g29637 | LOC_Os02g50100 | Os02g0733800 | - | Detail |
| CX2g020845 | 2:28,063,963-28,064,205 | - | - | C2H2g26091 | LOC_Os02g50110 | Os02g0733900 | OsSYL2 | Detail |
| CX2g019678 | 2:28,082,292-28,082,813 | + | C1H2g09486 | C2H2g14181 | LOC_Os02g50130 | Os02g0734300 | - | Detail |
| CX2g022579 | 2:28,115,739-28,116,545 | + | - | - | - | - | - | Detail |
| CX2g021806 | 2:28,118,823-28,119,398 | + | - | - | - | - | - | Detail |
| CX2g022067 | 2:28,121,530-28,123,342 | + | C1H2g02030 | C2H2g24372 | LOC_Os02g50220 | Os02g0735100 | - | Detail |
| CX2g022006 | 2:28,126,977-28,130,279 | + | C1H2g29553 | C2H2g15743 | LOC_Os02g50230 | Os02g0735100 | - | Detail |
| CX2g020555 | 2:28,132,922-28,136,165 | - | C1H2g01228 | C2H2g04098 | LOC_Os02g50240 | Os02g0735200 | - | Detail |
| CX2g023037 | 2:28,145,245-28,146,096 | + | C1H2g08659 | C2H2g05950 | LOC_Os02g50250 | - | - | Detail |
| CX2g023940 | 2:28,150,357-28,153,890 | + | C1H2g08659 | C2H2g05950 | LOC_Os02g50250 | - | - | Detail |
| CX2g024168 | 2:28,158,134-28,161,666 | + | C1H2g08659 | C2H2g19052 | LOC_Os02g50250 | - | - | Detail |
| CX2g019816 | 2:28,163,440-28,166,134 | + | C1H2g07791 | C2H2g13627 | LOC_Os02g50270 | Os02g0735700 | - | Detail |
| CX2g019477 | 2:28,167,092-28,169,023 | + | C1H2g05849 | C2H2g15470 | LOC_Os02g50280 | Os02g0735800 | - | Detail |
| CX2g023040 | 2:28,170,374-28,172,436 | - | C1H2g22855 | C2H2g10624 | LOC_Os02g50290 | Os02g0735900 | - | Detail |
| CX2g019949 | 2:28,184,302-28,189,172 | + | C1H2g03349 | C2H2g27320 | LOC_Os02g50320 | Os02g0736100 | - | Detail |
| CX2g021853 | 2:28,192,255-28,199,912 | + | C1H2g05522 | C2H2g10188 | LOC_Os02g50330 | Os02g0736200 | RDR1, OsRDR1 | Detail |
| CX2g019081 | 2:28,200,454-28,207,095 | - | C1H2g23012 | C2H2g27537 | LOC_Os02g50340 | Os02g0736300 | - | Detail |
| CX2g021694 | 2:28,208,876-28,212,277 | - | C1H2g06623 | C2H2g19993 | LOC_Os02g50350 | Os02g0736400 | OsDHODH1 | Detail |
| CX2g020413 | 2:28,214,092-28,219,604 | - | C1H2g07187 | C2H2g07436 | LOC_Os02g50360 | Os02g0736500 | - | Detail |