| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022148 | 2:27,944,814-27,951,130 | + | C1H2g08098 | C2H2g21462 | LOC_Os02g49840 | Os02g0731200 | OsMADS57 | Detail |
| CX2g020726 | 2:27,960,243-27,960,761 | + | C1H2g22689 | C2H2g03897 | LOC_Os02g49850 | Os02g0731400 | - | Detail |
| CX2g021129 | 2:27,961,424-27,962,355 | - | C1H2g07036 | C2H2g25341 | LOC_Os02g49860 | Os02g0731500 | - | Detail |
| CX2g023460 | 2:27,964,381-27,965,413 | + | C1H2g04869 | C2H2g19830 | LOC_Os02g49870 | Os02g0731600 | - | Detail |
| CX2g020051 | 2:27,966,395-27,967,848 | - | C1H2g00972 | C2H2g14461 | LOC_Os02g49880 | Os02g0731700 | OsK, Ghd2 | Detail |
| CX2g020810 | 2:27,976,415-27,976,576 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g024323 | 2:27,982,555-27,982,704 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g019425 | 2:27,988,321-27,990,039 | - | - | - | - | - | - | Detail |
| CX2g022879 | 2:27,996,999-28,000,937 | + | C1H2g22578 | C2H2g12585 | LOC_Os02g49950 | Os02g0732200 | - | Detail |
| CX2g019944 | 2:28,003,145-28,004,020 | - | - | - | - | Os02g0732350 | - | Detail |
| CX2g019464 | 2:28,007,396-28,008,513 | + | C1H2g28110 | C2H2g20922 | LOC_Os02g49970 | Os02g0732400 | - | Detail |
| CX2g023132 | 2:28,011,996-28,013,423 | - | C1H2g10850 | C2H2g17194 | LOC_Os02g49980 | Os02g0732500 | - | Detail |
| CX2g021353 | 2:28,018,102-28,019,116 | - | C1H2g05502 | C2H2g26612 | LOC_Os02g49986 | Os02g0732600 | Os2R_MYB30 | Detail |
| CX2g020946 | 2:28,020,705-28,031,879 | - | C1H2g24742 | C2H2g25135 | LOC_Os02g49992 | Os02g0732700 | - | Detail |
| CX2g023389 | 2:28,032,753-28,034,348 | - | C1H2g27424 | C2H2g26888 | LOC_Os02g50000 | Os02g0732800 | - | Detail |
| CX2g020808 | 2:28,035,763-28,038,715 | + | C1H2g26386 | C2H2g07391 | LOC_Os02g50010 | Os02g0732900 | - | Detail |
| CX2g019891 | 2:28,039,260-28,041,414 | - | C1H2g27002 | C2H2g23355 | LOC_Os02g50020 | Os02g0733001 | - | Detail |
| CX2g018981 | 2:28,045,783-28,046,058 | - | - | - | LOC_Os02g55450 | - | - | Detail |
| CX2g019255 | 2:28,048,768-28,051,512 | + | C1H2g31248 | C2H2g17859 | LOC_Os02g50040 | Os02g0733300 | OsGH9B1 | Detail |
| CX2g024096 | 2:28,052,222-28,052,873 | - | C1H2g05277 | C2H2g23239 | LOC_Os02g50050 | Os02g0733400 | - | Detail |