| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g05719 | 7:1,804,205-1,804,696 | + | C2H7g04010 | CX7g048543 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| C1H7g16311 | 7:1,809,748-1,811,202 | - | C2H7g14480 | CX7g049302 | LOC_Os07g04970 | Os07g0142700 | - | Detail |
| C1H7g23399 | 7:1,817,378-1,820,269 | + | C2H7g21727 | CX7g046865 | LOC_Os07g04990 | Os07g0142900 | - | Detail |
| C1H7g28462 | 7:1,821,068-1,824,762 | + | C2H7g27275 | CX7g048357 | LOC_Os07g05000 | Os07g0143000 | - | Detail |
| C1H7g12552 | 7:1,830,078-1,831,825 | + | C2H7g14513 | CX7g048872 | LOC_Os07g05010 | Os07g0143200 | OsPIF14, OsPIF14β, OsPIF14b, PIL14 | Detail |
| C1H7g09908 | 7:1,841,065-1,843,557 | - | C2H7g20668 | CX7g046854 | - | - | - | Detail |
| C1H7g25943 | 7:1,846,323-1,847,257 | - | C2H7g24721 | CX7g048569 | LOC_Os07g05040 | Os07g0143600 | - | Detail |
| C1H7g01640 | 7:1,848,063-1,853,483 | - | C2H7g00608 | CX7g048216 | LOC_Os07g05050 | Os07g0143700 | OsRH53 | Detail |
| C1H7g27141 | 7:1,869,555-1,869,847 | + | C2H4g24787 | CX7g050400 | - | - | - | Detail |
| C1H7g10624 | 7:1,874,356-1,876,217 | + | C2H7g04210 | CX7g049966 | LOC_Os07g05110 | Os07g0144500 | - | Detail |
| C1H7g23348 | 7:1,876,620-1,878,553 | - | C2H7g16275 | CX7g049847 | LOC_Os07g05120 | - | - | Detail |
| C1H7g28674 | 7:1,879,312-1,884,015 | - | C2H7g17564 | - | - | - | - | Detail |
| C1H7g03354 | 7:1,885,784-1,886,261 | + | C2H7g12809 | - | - | Os07g0144732 | - | Detail |
| C1H7g17569 | 7:1,902,974-1,908,418 | - | C2H7g13737 | CX7g049183 | LOC_Os07g05190 | Os07g0145400 | - | Detail |
| C1H7g14394 | 7:1,922,066-1,922,779 | - | C2H7g08515 | CX7g049547 | LOC_Os07g05260 | Os07g0146300 | - | Detail |
| C1H7g28358 | 7:1,936,905-1,938,030 | + | C2H7g29915 | CX7g048696 | LOC_Os07g05360 | Os07g0147500 | - | Detail |
| C1H7g21360 | 7:2,036,231-2,037,309 | + | C2H7g29915 | CX7g048670 | LOC_Os07g05360 | Os07g0147500 | - | Detail |
| C1H7g08457 | 7:2,038,918-2,039,753 | + | C2H7g26151 | CX7g046114 | LOC_Os07g05365 | Os07g0147550 | - | Detail |
| C1H7g12237 | 7:2,040,318-2,043,518 | - | C2H7g04201 | CX7g047728 | LOC_Os07g05370 | Os07g0147600 | - | Detail |
| C1H7g27117 | 7:2,047,482-2,049,662 | + | C2H7g24746 | CX7g049484 | LOC_Os07g05380 | Os07g0147700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022148 | 2:27,944,814-27,951,130 | + | C1H2g08098 | C2H2g21462 | LOC_Os02g49840 | Os02g0731200 | OsMADS57 | Detail |
| CX2g020726 | 2:27,960,243-27,960,761 | + | C1H2g22689 | C2H2g03897 | LOC_Os02g49850 | Os02g0731400 | - | Detail |
| CX2g021129 | 2:27,961,424-27,962,355 | - | C1H2g07036 | C2H2g25341 | LOC_Os02g49860 | Os02g0731500 | - | Detail |
| CX2g023460 | 2:27,964,381-27,965,413 | + | C1H2g04869 | C2H2g19830 | LOC_Os02g49870 | Os02g0731600 | - | Detail |
| CX2g020051 | 2:27,966,395-27,967,848 | - | C1H2g00972 | C2H2g14461 | LOC_Os02g49880 | Os02g0731700 | OsK, Ghd2 | Detail |
| CX2g020810 | 2:27,976,415-27,976,576 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g024323 | 2:27,982,555-27,982,704 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g019425 | 2:27,988,321-27,990,039 | - | - | - | - | - | - | Detail |
| CX2g022879 | 2:27,996,999-28,000,937 | + | C1H2g22578 | C2H2g12585 | LOC_Os02g49950 | Os02g0732200 | - | Detail |
| CX2g019944 | 2:28,003,145-28,004,020 | - | - | - | - | Os02g0732350 | - | Detail |
| CX2g019464 | 2:28,007,396-28,008,513 | + | C1H2g28110 | C2H2g20922 | LOC_Os02g49970 | Os02g0732400 | - | Detail |
| CX2g023132 | 2:28,011,996-28,013,423 | - | C1H2g10850 | C2H2g17194 | LOC_Os02g49980 | Os02g0732500 | - | Detail |
| CX2g021353 | 2:28,018,102-28,019,116 | - | C1H2g05502 | C2H2g26612 | LOC_Os02g49986 | Os02g0732600 | Os2R_MYB30 | Detail |
| CX2g020946 | 2:28,020,705-28,031,879 | - | C1H2g24742 | C2H2g25135 | LOC_Os02g49992 | Os02g0732700 | - | Detail |
| CX2g023389 | 2:28,032,753-28,034,348 | - | C1H2g27424 | C2H2g26888 | LOC_Os02g50000 | Os02g0732800 | - | Detail |
| CX2g020808 | 2:28,035,763-28,038,715 | + | C1H2g26386 | C2H2g07391 | LOC_Os02g50010 | Os02g0732900 | - | Detail |
| CX2g019891 | 2:28,039,260-28,041,414 | - | C1H2g27002 | C2H2g23355 | LOC_Os02g50020 | Os02g0733001 | - | Detail |
| CX2g018981 | 2:28,045,783-28,046,058 | - | - | - | LOC_Os02g55450 | - | - | Detail |
| CX2g019255 | 2:28,048,768-28,051,512 | + | C1H2g31248 | C2H2g17859 | LOC_Os02g50040 | Os02g0733300 | OsGH9B1 | Detail |
| CX2g024096 | 2:28,052,222-28,052,873 | - | C1H2g05277 | C2H2g23239 | LOC_Os02g50050 | Os02g0733400 | - | Detail |