| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22497 | 4:608,553-609,763 | + | C1H4g22895 | CX4g034880 | LOC_Os04g01930 | Os04g0109900 | - | Detail |
| C2H4g13476 | 4:661,919-668,448 | + | C1H4g18566 | CX4g032566 | LOC_Os04g01970 | Os04g0110300 | - | Detail |
| C2H4g23508 | 4:670,151-672,685 | + | C1H4g12929 | CX4g034294 | LOC_Os04g01980 | Os04g0110400 | - | Detail |
| C2H4g21870 | 4:677,322-682,276 | - | C1H4g14298 | CX4g032574 | LOC_Os04g02000 | Os04g0110600 | OsSTL1 | Detail |
| C2H4g18873 | 4:687,564-689,253 | - | C1H4g28215 | CX4g031548 | - | - | - | Detail |
| C2H4g25092 | 4:709,146-710,670 | + | C1H4g05772 | CX4g035956 | LOC_Os04g02030 | Os04g0111100 | - | Detail |
| C2H4g22392 | 4:713,746-718,166 | - | C1H4g05772 | CX4g035956 | LOC_Os04g02030 | Os04g0111100 | - | Detail |
| C2H4g08632 | 4:721,545-723,301 | + | C1H4g20764 | CX4g036450 | LOC_Os09g25740 | Os04g0536300 | YAB5, OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1 | Detail |
| C2H4g19107 | 4:723,807-727,848 | - | C1H4g08342 | CX4g034175 | LOC_Os04g02050 | Os04g0111200 | - | Detail |
| C2H4g16798 | 4:733,199-737,429 | - | C1H4g15454 | CX4g031586 | LOC_Os04g02140 | Os04g0112200 | OsE2Fc | Detail |
| C2H4g05319 | 4:740,677-747,238 | - | C1H4g00631 | CX4g033275 | LOC_Os04g02150 | Os04g0112300 | - | Detail |
| C2H4g29574 | 4:754,582-757,461 | + | C1H4g07839 | CX4g032358 | LOC_Os04g02500 | Os04g0115400 | - | Detail |
| C2H4g06234 | 4:762,329-765,855 | + | C1H4g24213 | CX4g032534 | LOC_Os04g02510 | Os04g0115500 | OsTIF1 | Detail |
| C2H4g07573 | 4:772,840-778,752 | - | C1H4g16974 | CX4g032131 | LOC_Os04g02550 | Os04g0115650 | - | Detail |
| C2H4g18135 | 4:791,005-792,634 | - | C1H4g16974 | CX4g032921 | LOC_Os04g02520 | Os04g0115650 | - | Detail |
| C2H4g05459 | 4:800,687-804,647 | - | C1H2g20339 | CX4g035069 | LOC_Os02g22580 | Os10g0388600 | - | Detail |
| C2H4g11156 | 4:812,094-816,431 | - | C1H4g10301 | CX4g034543 | LOC_Os07g15160 | Os04g0357300 | - | Detail |
| C2H4g01183 | 4:817,308-821,222 | - | - | CX4g034543 | - | - | - | Detail |
| C2H4g17583 | 4:823,317-823,728 | + | - | - | - | - | - | Detail |
| C2H4g14840 | 4:826,123-833,410 | - | C1H4g26900 | CX4g036593 | LOC_Os04g02550 | Os04g0115650 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023611 | 2:27,831,423-27,832,936 | + | C1H2g07458 | C2H2g09268 | LOC_Os02g49630 | Os02g0728800 | OsTET3 | Detail |
| CX2g018993 | 2:27,841,021-27,844,650 | + | C1H2g11463 | C2H2g19272 | LOC_Os02g49650 | Os02g0729100 | - | Detail |
| CX2g019218 | 2:27,846,888-27,848,230 | - | C1H2g21451 | C2H2g16186 | LOC_Os02g49660 | Os02g0729200 | OsXyBAT3 | Detail |
| CX2g021273 | 2:27,848,798-27,850,496 | - | C1H2g08307 | C2H2g16186 | - | Os02g0729350 | - | Detail |
| CX2g021202 | 2:27,853,133-27,854,429 | - | C1H2g10424 | C2H2g22569 | LOC_Os02g49680 | Os02g0729400 | - | Detail |
| CX2g022732 | 2:27,869,454-27,870,802 | + | C1H2g03384 | C2H2g11855 | LOC_Os02g49700 | Os02g0729700 | - | Detail |
| CX2g022857 | 2:27,879,785-27,882,434 | + | C1H2g20265 | C2H2g18750 | LOC_Os02g49710 | Os02g0730050 | - | Detail |
| CX2g024291 | 2:27,882,682-27,886,022 | - | C1H2g00762 | C2H2g24627 | LOC_Os02g49720 | Os02g0730000 | ALDH2a | Detail |
| CX2g024916 | 2:27,887,712-27,891,525 | - | C1H2g11181 | C2H2g28834 | LOC_Os02g49730 | Os02g0730100 | - | Detail |
| CX2g022441 | 2:27,892,547-27,892,786 | - | - | - | - | - | - | Detail |
| CX2g020749 | 2:27,896,941-27,897,093 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g021108 | 2:27,904,492-27,908,339 | + | C1H2g01906 | C2H2g02137 | LOC_Os02g49760 | Os02g0730300 | - | Detail |
| CX2g020148 | 2:27,912,783-27,916,551 | + | C1H2g17293 | C2H2g29055 | LOC_Os02g49770 | Os02g0730400 | - | Detail |
| CX2g021412 | 2:27,917,916-27,919,317 | - | C1H2g27973 | C2H2g02843 | LOC_Os02g49780 | Os02g0730500 | - | Detail |
| CX2g024911 | 2:27,920,431-27,922,930 | + | C1H2g19216 | C2H2g05336 | LOC_Os02g49790 | Os02g0730600 | - | Detail |
| CX2g022531 | 2:27,923,614-27,926,728 | - | C1H2g31196 | C2H2g23383 | LOC_Os02g49800 | Os02g0730700 | - | Detail |
| CX2g021629 | 2:27,928,135-27,928,305 | - | - | - | - | Os02g0730751 | - | Detail |
| CX2g023418 | 2:27,929,101-27,931,869 | + | C1H2g13861 | C2H2g19263 | LOC_Os02g49820 | Os02g0730800 | - | Detail |
| CX2g023390 | 2:27,932,210-27,933,301 | - | C1H2g17305 | C2H2g25104 | LOC_Os02g49830 | Os02g0730900 | - | Detail |
| CX2g019955 | 2:27,940,734-27,940,901 | + | - | - | - | - | - | Detail |