| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25383 | 1:6,016,659-6,017,612 | - | C1H1g19662 | CX1g004809 | LOC_Os01g12400 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| C2H1g06877 | 1:6,018,080-6,018,949 | - | C1H1g02057 | CX1g004809 | LOC_Os01g12410 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| C2H1g00939 | 1:6,023,568-6,028,266 | - | C1H1g04603 | - | - | - | - | Detail |
| C2H1g15856 | 1:6,029,178-6,031,628 | + | C1H1g19662 | CX1g003236 | LOC_Os01g12420 | Os01g0223900 | SDRLK-47 | Detail |
| C2H1g29853 | 1:6,033,552-6,035,954 | - | C1H1g19662 | CX1g002105 | LOC_Os01g12430 | Os01g0224000 | SDRLK-48 | Detail |
| C2H1g22176 | 1:6,055,467-6,056,612 | + | C1H1g08851 | CX1g003851 | LOC_Os01g12440 | Os01g0224100 | - | Detail |
| C2H1g17446 | 1:6,073,162-6,075,817 | - | C1H1g10595 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C2H1g06705 | 1:6,076,291-6,077,687 | + | C1H1g28759 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C2H1g14688 | 1:6,079,484-6,082,353 | + | C1H1g07004 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C2H1g11914 | 1:6,084,157-6,086,154 | - | C1H1g12177 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C2H1g03625 | 1:6,101,830-6,105,532 | + | C1H1g07815 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C2H1g01358 | 1:6,126,666-6,129,350 | - | C1H1g11599 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C2H1g06869 | 1:6,136,314-6,143,339 | + | C1H1g06137 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C2H1g08071 | 1:6,144,690-6,151,484 | + | C1H1g01658 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C2H1g21338 | 1:6,151,761-6,156,636 | + | C1H1g10876 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C2H1g20462 | 1:6,157,508-6,159,650 | - | C1H1g09440 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C2H1g08221 | 1:6,160,616-6,162,617 | - | C1H1g18546 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C2H1g14460 | 1:6,169,478-6,169,933 | - | C1H1g27681 | CX1g004401 | LOC_Os01g12580 | Os01g0225600 | OsLea14-A | Detail |
| C2H1g14647 | 1:6,189,662-6,190,985 | - | C1H1g11055 | CX1g003331 | LOC_Os01g12640 | Os01g0226200 | - | Detail |
| C2H1g27972 | 1:6,195,228-6,195,593 | - | C1H11g06426 | CX1g002909 | - | Os11g0702600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023611 | 2:27,831,423-27,832,936 | + | C1H2g07458 | C2H2g09268 | LOC_Os02g49630 | Os02g0728800 | OsTET3 | Detail |
| CX2g018993 | 2:27,841,021-27,844,650 | + | C1H2g11463 | C2H2g19272 | LOC_Os02g49650 | Os02g0729100 | - | Detail |
| CX2g019218 | 2:27,846,888-27,848,230 | - | C1H2g21451 | C2H2g16186 | LOC_Os02g49660 | Os02g0729200 | OsXyBAT3 | Detail |
| CX2g021273 | 2:27,848,798-27,850,496 | - | C1H2g08307 | C2H2g16186 | - | Os02g0729350 | - | Detail |
| CX2g021202 | 2:27,853,133-27,854,429 | - | C1H2g10424 | C2H2g22569 | LOC_Os02g49680 | Os02g0729400 | - | Detail |
| CX2g022732 | 2:27,869,454-27,870,802 | + | C1H2g03384 | C2H2g11855 | LOC_Os02g49700 | Os02g0729700 | - | Detail |
| CX2g022857 | 2:27,879,785-27,882,434 | + | C1H2g20265 | C2H2g18750 | LOC_Os02g49710 | Os02g0730050 | - | Detail |
| CX2g024291 | 2:27,882,682-27,886,022 | - | C1H2g00762 | C2H2g24627 | LOC_Os02g49720 | Os02g0730000 | ALDH2a | Detail |
| CX2g024916 | 2:27,887,712-27,891,525 | - | C1H2g11181 | C2H2g28834 | LOC_Os02g49730 | Os02g0730100 | - | Detail |
| CX2g022441 | 2:27,892,547-27,892,786 | - | - | - | - | - | - | Detail |
| CX2g020749 | 2:27,896,941-27,897,093 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g021108 | 2:27,904,492-27,908,339 | + | C1H2g01906 | C2H2g02137 | LOC_Os02g49760 | Os02g0730300 | - | Detail |
| CX2g020148 | 2:27,912,783-27,916,551 | + | C1H2g17293 | C2H2g29055 | LOC_Os02g49770 | Os02g0730400 | - | Detail |
| CX2g021412 | 2:27,917,916-27,919,317 | - | C1H2g27973 | C2H2g02843 | LOC_Os02g49780 | Os02g0730500 | - | Detail |
| CX2g024911 | 2:27,920,431-27,922,930 | + | C1H2g19216 | C2H2g05336 | LOC_Os02g49790 | Os02g0730600 | - | Detail |
| CX2g022531 | 2:27,923,614-27,926,728 | - | C1H2g31196 | C2H2g23383 | LOC_Os02g49800 | Os02g0730700 | - | Detail |
| CX2g021629 | 2:27,928,135-27,928,305 | - | - | - | - | Os02g0730751 | - | Detail |
| CX2g023418 | 2:27,929,101-27,931,869 | + | C1H2g13861 | C2H2g19263 | LOC_Os02g49820 | Os02g0730800 | - | Detail |
| CX2g023390 | 2:27,932,210-27,933,301 | - | C1H2g17305 | C2H2g25104 | LOC_Os02g49830 | Os02g0730900 | - | Detail |
| CX2g019955 | 2:27,940,734-27,940,901 | + | - | - | - | - | - | Detail |