| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g06549 | 4:20,500,435-20,505,313 | - | C1H4g03925 | - | LOC_Os04g39900 | Os04g0474900 | OsTAGG1, Os4BGlu13 | Detail |
| C2H4g07132 | 4:20,506,722-20,511,344 | - | - | - | - | Os04g0475000 | - | Detail |
| C2H4g15875 | 4:20,507,944-20,510,355 | + | C1H4g27571 | CX4g031592 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| C2H4g18216 | 4:20,514,254-20,516,662 | + | C1H4g19181 | CX4g034833 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| C2H4g26452 | 4:20,518,651-20,519,679 | + | C1H4g08744 | CX4g033183 | LOC_Os04g39940 | Os04g0475250 | - | Detail |
| C2H4g17863 | 4:20,522,245-20,522,775 | - | C1H4g16959 | CX4g035822 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| C2H4g17299 | 4:20,523,668-20,524,519 | + | - | CX4g035952 | LOC_Os04g39960 | Os04g0475400 | - | Detail |
| C2H4g05329 | 4:20,525,382-20,526,617 | - | C1H4g29172 | CX4g033449 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| C2H4g06421 | 4:20,527,536-20,529,104 | - | C1H4g28080 | CX4g034856 | LOC_Os04g39980 | Os04g0475600 | DAO | Detail |
| C2H4g14060 | 4:20,532,754-20,536,682 | - | C1H4g25714 | CX4g035158 | LOC_Os04g40010 | Os04g0675600 | - | Detail |
| C2H4g03255 | 4:20,543,310-20,545,681 | + | C1H4g09528 | CX4g033390 | LOC_Os04g40030 | Os04g0476000 | - | Detail |
| C2H4g11644 | 4:20,546,470-20,552,948 | - | C1H4g27545 | CX4g033811 | LOC_Os04g40040 | Os04g0476100 | - | Detail |
| C2H4g01499 | 4:20,561,499-20,565,352 | + | C1H4g01159 | CX4g033662 | LOC_Os04g40050 | Os04g0476400 | - | Detail |
| C2H4g21737 | 4:20,566,135-20,571,092 | + | C1H4g20165 | CX4g033662 | LOC_Os04g40060 | Os04g0476500 | - | Detail |
| C2H4g08434 | 4:20,572,584-20,573,027 | + | C1H4g28689 | CX4g034928 | - | - | - | Detail |
| C2H4g06682 | 4:20,576,146-20,579,094 | + | C1H4g28689 | CX4g034928 | LOC_Os04g40070 | Os04g0476600 | - | Detail |
| C2H4g27838 | 4:20,580,451-20,583,689 | + | C1H4g22382 | CX4g036402 | LOC_Os04g40080 | Os04g0476700 | OsIRL3 | Detail |
| C2H4g01330 | 4:20,584,011-20,588,508 | - | C1H4g14627 | CX4g031992 | LOC_Os04g40090 | Os04g0476800 | OsNBR1 | Detail |
| C2H4g29662 | 4:20,593,366-20,595,825 | + | C1H4g19548 | CX4g034194 | LOC_Os04g40100 | Os04g0477000 | - | Detail |
| C2H4g02766 | 4:20,598,950-20,599,438 | - | C1H4g16625 | CX4g033655 | LOC_Os04g40120 | Os04g0477100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021819 | 2:27,716,272-27,717,051 | - | C1H2g10199 | C2H2g29436 | LOC_Os02g49370 | Os02g0725700 | OsLEC1, OsLEC1/OsHAP3E, OsHAP3E | Detail |
| CX2g023592 | 2:27,720,765-27,721,485 | - | C1H2g10199 | C2H2g29177 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| CX2g022083 | 2:27,722,374-27,722,529 | - | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g022300 | 2:27,727,678-27,728,472 | - | - | C2H2g08490 | LOC_Os02g49420 | Os02g0726000 | - | Detail |
| CX2g023852 | 2:27,735,551-27,736,399 | - | C1H2g09874 | C2H2g29636 | LOC_Os02g49440 | Os02g0726300 | - | Detail |
| CX2g019656 | 2:27,748,798-27,751,738 | + | C1H2g05214 | C2H2g05677 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| CX2g023556 | 2:27,756,937-27,760,082 | + | C1H2g12431 | C2H2g30015 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| CX2g020183 | 2:27,761,927-27,762,130 | - | - | - | - | - | - | Detail |
| CX2g024926 | 2:27,762,661-27,763,344 | + | - | C2H2g00814 | LOC_Os02g49470 | Os02g0726600 | - | Detail |
| CX2g023944 | 2:27,763,834-27,766,241 | - | C1H2g21836 | C2H2g09813 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| CX2g022260 | 2:27,770,905-27,772,911 | - | C1H2g12455 | C2H2g17575 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| CX2g024123 | 2:27,774,429-27,779,649 | + | C1H2g29396 | C2H2g05996 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| CX2g019961 | 2:27,782,801-27,785,714 | - | C1H2g07912 | C2H2g05669 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| CX2g023170 | 2:27,787,371-27,787,595 | + | C1H2g02472 | C2H2g19256 | LOC_Os02g49550 | Os02g0727700 | - | Detail |
| CX2g019013 | 2:27,798,884-27,799,141 | + | C1H2g05141 | C2H2g25351 | LOC_Os02g49560 | Os02g0728001 | bZIP43 | Detail |
| CX2g021134 | 2:27,800,794-27,808,540 | - | C1H2g01405 | C2H2g28910 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| CX2g022512 | 2:27,810,443-27,813,173 | + | C1H2g31094 | C2H2g03568 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| CX2g020763 | 2:27,817,491-27,820,683 | - | C1H2g01710 | C2H2g04353 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| CX2g020190 | 2:27,824,940-27,827,490 | - | C1H2g15124 | C2H2g01821 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| CX2g023333 | 2:27,827,457-27,830,702 | + | C1H2g22353 | C2H2g11437 | LOC_Os02g49620 | Os02g0728700 | - | Detail |