| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g16424 | 4:18,202,129-18,204,963 | - | C1H4g26649 | CX4g034353 | LOC_Os04g35100 | Os04g0430200 | - | Detail |
| C2H4g24538 | 4:18,205,767-18,215,164 | + | C1H4g18238 | CX4g031775 | LOC_Os04g35114 | Os04g0430400 | - | Detail |
| C2H4g27705 | 4:18,222,314-18,224,236 | + | C1H4g28825 | CX4g034052 | LOC_Os04g35130 | Os04g0430600 | - | Detail |
| C2H4g02140 | 4:18,231,428-18,233,758 | + | C1H4g07049 | CX4g034081 | LOC_Os04g35140 | Os04g0430700 | - | Detail |
| C2H4g06351 | 4:18,233,821-18,237,882 | - | C1H4g08689 | CX4g032243 | - | Os04g0430800 | - | Detail |
| C2H4g00228 | 4:18,240,905-18,244,034 | + | C1H4g16671 | CX4g031614 | LOC_Os04g35160 | Os04g0430900 | - | Detail |
| C2H4g04980 | 4:18,245,932-18,249,578 | + | C1H4g02411 | CX4g031518 | LOC_Os04g35170 | Os04g0431000 | - | Detail |
| C2H4g22899 | 4:18,249,974-18,251,867 | - | C1H4g23756 | CX4g033664 | LOC_Os04g35180 | Os04g0431100 | - | Detail |
| C2H4g08990 | 4:18,253,416-18,258,195 | + | C1H4g00828 | CX4g032072 | LOC_Os04g35190 | Os04g0431200 | OsDRF1 | Detail |
| C2H4g21469 | 4:18,258,400-18,260,264 | - | C1H4g00436 | - | LOC_Os04g35200 | Os04g0431300 | - | Detail |
| C2H4g16731 | 4:18,265,399-18,271,598 | + | C1H4g30671 | CX4g032072 | LOC_Os04g35210 | Os04g0431700 | Bph6 | Detail |
| C2H4g00292 | 4:18,273,198-18,273,533 | - | C1H4g00436 | - | LOC_Os04g35200 | Os04g0431300 | - | Detail |
| C2H4g28702 | 4:18,274,990-18,282,346 | + | C1H4g30671 | CX4g032072 | LOC_Os04g35210 | Os04g0431700 | Bph6 | Detail |
| C2H4g05691 | 4:18,283,653-18,285,954 | - | C1H4g13913 | CX4g033773 | LOC_Os04g35220 | Os04g0431800 | - | Detail |
| C2H4g00811 | 4:18,296,404-18,301,603 | + | C1H4g20735 | CX4g034641 | LOC_Os04g35240 | Os04g0432000 | SAPK7, OsSAPK7 | Detail |
| C2H4g29290 | 4:18,305,746-18,307,248 | - | C1H4g18122 | CX4g034875 | LOC_Os04g35250 | Os04g0432100 | - | Detail |
| C2H4g05666 | 4:18,309,200-18,326,486 | - | C1H4g10844 | CX4g031473 | LOC_Os04g35260 | Os04g0432200 | - | Detail |
| C2H4g04986 | 4:18,330,454-18,331,965 | + | C1H4g11061 | CX4g031867 | LOC_Os04g35270 | Os04g0432300 | - | Detail |
| C2H4g00867 | 4:18,333,631-18,338,177 | - | C1H4g30724 | CX4g034933 | LOC_Os04g35280 | Os04g0432400 | - | Detail |
| C2H4g00031 | 4:18,347,329-18,350,223 | - | C1H4g14575 | CX4g031465 | LOC_Os04g35290 | Os04g0432500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021819 | 2:27,716,272-27,717,051 | - | C1H2g10199 | C2H2g29436 | LOC_Os02g49370 | Os02g0725700 | OsLEC1, OsLEC1/OsHAP3E, OsHAP3E | Detail |
| CX2g023592 | 2:27,720,765-27,721,485 | - | C1H2g10199 | C2H2g29177 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| CX2g022083 | 2:27,722,374-27,722,529 | - | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g022300 | 2:27,727,678-27,728,472 | - | - | C2H2g08490 | LOC_Os02g49420 | Os02g0726000 | - | Detail |
| CX2g023852 | 2:27,735,551-27,736,399 | - | C1H2g09874 | C2H2g29636 | LOC_Os02g49440 | Os02g0726300 | - | Detail |
| CX2g019656 | 2:27,748,798-27,751,738 | + | C1H2g05214 | C2H2g05677 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| CX2g023556 | 2:27,756,937-27,760,082 | + | C1H2g12431 | C2H2g30015 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| CX2g020183 | 2:27,761,927-27,762,130 | - | - | - | - | - | - | Detail |
| CX2g024926 | 2:27,762,661-27,763,344 | + | - | C2H2g00814 | LOC_Os02g49470 | Os02g0726600 | - | Detail |
| CX2g023944 | 2:27,763,834-27,766,241 | - | C1H2g21836 | C2H2g09813 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| CX2g022260 | 2:27,770,905-27,772,911 | - | C1H2g12455 | C2H2g17575 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| CX2g024123 | 2:27,774,429-27,779,649 | + | C1H2g29396 | C2H2g05996 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| CX2g019961 | 2:27,782,801-27,785,714 | - | C1H2g07912 | C2H2g05669 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| CX2g023170 | 2:27,787,371-27,787,595 | + | C1H2g02472 | C2H2g19256 | LOC_Os02g49550 | Os02g0727700 | - | Detail |
| CX2g019013 | 2:27,798,884-27,799,141 | + | C1H2g05141 | C2H2g25351 | LOC_Os02g49560 | Os02g0728001 | bZIP43 | Detail |
| CX2g021134 | 2:27,800,794-27,808,540 | - | C1H2g01405 | C2H2g28910 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| CX2g022512 | 2:27,810,443-27,813,173 | + | C1H2g31094 | C2H2g03568 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| CX2g020763 | 2:27,817,491-27,820,683 | - | C1H2g01710 | C2H2g04353 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| CX2g020190 | 2:27,824,940-27,827,490 | - | C1H2g15124 | C2H2g01821 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| CX2g023333 | 2:27,827,457-27,830,702 | + | C1H2g22353 | C2H2g11437 | LOC_Os02g49620 | Os02g0728700 | - | Detail |