| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15991 | 2:3,199,232-3,201,157 | - | C2H2g19465 | CX2g019496 | LOC_Os02g07160 | Os02g0168100 | OsHPPD | Detail |
| C1H2g12427 | 2:3,204,214-3,204,806 | - | C2H2g21644 | CX2g021826 | LOC_Os02g07170 | Os02g0168200 | - | Detail |
| C1H2g27005 | 2:3,209,293-3,212,188 | + | C2H2g14957 | CX2g022739 | LOC_Os02g07180 | Os02g0168300 | - | Detail |
| C1H2g17697 | 2:3,216,393-3,221,516 | + | C2H2g15308 | CX2g023861 | LOC_Os02g07190 | Os02g0168400 | - | Detail |
| C1H2g15097 | 2:3,224,870-3,226,195 | + | C2H2g27598 | CX2g019993 | LOC_Os02g07200 | Os02g0168500 | - | Detail |
| C1H2g02992 | 2:3,227,323-3,229,979 | - | C2H2g30613 | CX2g020274 | LOC_Os02g07210 | Os02g0168600 | - | Detail |
| C1H2g24249 | 2:3,232,760-3,234,675 | - | C2H2g22535 | CX2g022989 | LOC_Os02g07220 | Os02g0168700 | - | Detail |
| C1H2g16743 | 2:3,235,605-3,238,520 | + | C2H2g29143 | CX2g019641 | LOC_Os02g07230 | Os02g0168800 | - | Detail |
| C1H2g05199 | 2:3,239,066-3,240,376 | - | C2H2g05298 | CX2g023253 | LOC_Os02g07240 | Os02g0168900 | - | Detail |
| C1H2g08763 | 2:3,241,208-3,244,905 | - | C2H2g28592 | CX2g023357 | LOC_Os02g07250 | Os02g0169000 | - | Detail |
| C1H2g16238 | 2:3,248,057-3,251,828 | + | C2H2g19444 | CX2g020247 | LOC_Os02g07260 | Os02g0169300 | - | Detail |
| C1H2g08697 | 2:3,259,911-3,268,968 | - | C2H2g02121 | CX2g023065 | LOC_Os02g07310 | Os02g0169400 | OsAGO17 | Detail |
| C1H2g13885 | 2:3,281,863-3,285,555 | + | C2H2g06608 | CX6g043108 | LOC_Os02g07330 | Os02g0169700 | - | Detail |
| C1H2g04805 | 2:3,287,984-3,301,446 | + | C2H2g01264 | CX2g022837 | LOC_Os02g07340 | Os02g0169800 | - | Detail |
| C1H2g14236 | 2:3,302,407-3,306,269 | - | C2H2g22477 | CX2g022025 | LOC_Os02g07350 | Os02g0169900 | - | Detail |
| C1H2g12408 | 2:3,307,268-3,312,967 | + | C2H2g09938 | CX2g019659 | LOC_Os02g07360 | Os02g0565400 | - | Detail |
| C1H2g30375 | 2:3,313,142-3,314,918 | + | C2H2g21866 | CX6g043108 | LOC_Os02g07410 | Os02g0170100 | - | Detail |
| C1H2g28383 | 2:3,315,776-3,317,326 | - | C2H2g02927 | - | LOC_Os02g07420 | Os02g0170200 | - | Detail |
| C1H2g02120 | 2:3,319,591-3,320,354 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| C1H2g03281 | 2:3,323,144-3,323,712 | - | C2H2g25691 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021819 | 2:27,716,272-27,717,051 | - | C1H2g10199 | C2H2g29436 | LOC_Os02g49370 | Os02g0725700 | OsLEC1, OsLEC1/OsHAP3E, OsHAP3E | Detail |
| CX2g023592 | 2:27,720,765-27,721,485 | - | C1H2g10199 | C2H2g29177 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| CX2g022083 | 2:27,722,374-27,722,529 | - | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g022300 | 2:27,727,678-27,728,472 | - | - | C2H2g08490 | LOC_Os02g49420 | Os02g0726000 | - | Detail |
| CX2g023852 | 2:27,735,551-27,736,399 | - | C1H2g09874 | C2H2g29636 | LOC_Os02g49440 | Os02g0726300 | - | Detail |
| CX2g019656 | 2:27,748,798-27,751,738 | + | C1H2g05214 | C2H2g05677 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| CX2g023556 | 2:27,756,937-27,760,082 | + | C1H2g12431 | C2H2g30015 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| CX2g020183 | 2:27,761,927-27,762,130 | - | - | - | - | - | - | Detail |
| CX2g024926 | 2:27,762,661-27,763,344 | + | - | C2H2g00814 | LOC_Os02g49470 | Os02g0726600 | - | Detail |
| CX2g023944 | 2:27,763,834-27,766,241 | - | C1H2g21836 | C2H2g09813 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| CX2g022260 | 2:27,770,905-27,772,911 | - | C1H2g12455 | C2H2g17575 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| CX2g024123 | 2:27,774,429-27,779,649 | + | C1H2g29396 | C2H2g05996 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| CX2g019961 | 2:27,782,801-27,785,714 | - | C1H2g07912 | C2H2g05669 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| CX2g023170 | 2:27,787,371-27,787,595 | + | C1H2g02472 | C2H2g19256 | LOC_Os02g49550 | Os02g0727700 | - | Detail |
| CX2g019013 | 2:27,798,884-27,799,141 | + | C1H2g05141 | C2H2g25351 | LOC_Os02g49560 | Os02g0728001 | bZIP43 | Detail |
| CX2g021134 | 2:27,800,794-27,808,540 | - | C1H2g01405 | C2H2g28910 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| CX2g022512 | 2:27,810,443-27,813,173 | + | C1H2g31094 | C2H2g03568 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| CX2g020763 | 2:27,817,491-27,820,683 | - | C1H2g01710 | C2H2g04353 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| CX2g020190 | 2:27,824,940-27,827,490 | - | C1H2g15124 | C2H2g01821 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| CX2g023333 | 2:27,827,457-27,830,702 | + | C1H2g22353 | C2H2g11437 | LOC_Os02g49620 | Os02g0728700 | - | Detail |