| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g25885 | 2:511,212-511,736 | + | C2H2g09423 | CX2g023145 | - | Os02g0144300 | - | Detail |
| C1H2g28737 | 2:512,219-528,456 | - | C2H2g11436 | CX2g020170 | LOC_Os02g02050 | Os02g0110700 | - | Detail |
| C1H2g23635 | 2:534,022-539,607 | + | C2H2g03291 | - | - | - | - | Detail |
| C1H2g03642 | 2:542,529-550,508 | + | C2H2g28219 | CX2g024805 | LOC_Os02g02110 | - | - | Detail |
| C1H2g03397 | 2:547,047-550,223 | - | C2H2g25923 | CX2g023278 | LOC_Os02g02120 | Os02g0111600 | OsWAK11 | Detail |
| C1H2g11275 | 2:551,548-553,597 | + | C2H2g00106 | CX2g022213 | LOC_Os02g02130 | Os02g0111700 | - | Detail |
| C1H2g19068 | 2:557,087-560,215 | - | C2H2g09655 | CX2g021036 | LOC_Os02g02140 | Os02g0111800 | - | Detail |
| C1H2g08619 | 2:566,450-569,233 | + | C2H2g07259 | CX2g020132 | LOC_Os02g02150 | Os02g0111900 | - | Detail |
| C1H2g30533 | 2:570,769-571,595 | - | C2H2g15382 | CX2g024174 | LOC_Os02g02160 | Os02g0112000 | - | Detail |
| C1H2g03728 | 2:574,795-576,396 | + | - | CX2g024535 | LOC_Os02g02190 | Os02g0112600 | NRT2.2, OsNRT2.2, OsNRT2.1 | Detail |
| C1H2g31025 | 2:586,167-587,768 | - | - | CX2g024535 | LOC_Os02g02190 | Os02g0112100 | NRT2.1, OsNRT2.1, OsNRT2.2 | Detail |
| C1H2g07735 | 2:591,979-603,893 | - | C2H2g17743 | CX2g019924 | LOC_Os02g02210 | Os02g0112900 | OsGABA-T | Detail |
| C1H2g27463 | 2:619,875-623,681 | + | C2H2g20495 | CX2g023815 | LOC_Os02g02230 | Os02g0113200 | - | Detail |
| C1H2g00775 | 2:625,195-626,864 | + | C2H2g03042 | CX2g022139 | LOC_Os02g02270 | Os02g0113800 | - | Detail |
| C1H2g15227 | 2:627,487-628,048 | + | C2H2g10635 | - | - | - | - | Detail |
| C1H2g19532 | 2:628,835-639,667 | - | C2H2g25057 | CX2g019365 | LOC_Os02g02290 | Os02g0114000 | OsBRM | Detail |
| C1H2g15650 | 2:643,748-645,076 | - | C2H2g11144 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g07896 | 2:645,154-645,375 | - | C2H2g30135 | CX2g020949 | LOC_Os02g02310 | Os02g0114100 | - | Detail |
| C1H2g30436 | 2:648,161-652,853 | - | C2H2g25462 | CX2g024695 | LOC_Os02g02320 | Os02g0114200 | - | Detail |
| C1H2g22369 | 2:655,775-656,005 | + | - | CX2g023221 | LOC_Os02g02330 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021819 | 2:27,716,272-27,717,051 | - | C1H2g10199 | C2H2g29436 | LOC_Os02g49370 | Os02g0725700 | OsLEC1, OsLEC1/OsHAP3E, OsHAP3E | Detail |
| CX2g023592 | 2:27,720,765-27,721,485 | - | C1H2g10199 | C2H2g29177 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| CX2g022083 | 2:27,722,374-27,722,529 | - | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g022300 | 2:27,727,678-27,728,472 | - | - | C2H2g08490 | LOC_Os02g49420 | Os02g0726000 | - | Detail |
| CX2g023852 | 2:27,735,551-27,736,399 | - | C1H2g09874 | C2H2g29636 | LOC_Os02g49440 | Os02g0726300 | - | Detail |
| CX2g019656 | 2:27,748,798-27,751,738 | + | C1H2g05214 | C2H2g05677 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| CX2g023556 | 2:27,756,937-27,760,082 | + | C1H2g12431 | C2H2g30015 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| CX2g020183 | 2:27,761,927-27,762,130 | - | - | - | - | - | - | Detail |
| CX2g024926 | 2:27,762,661-27,763,344 | + | - | C2H2g00814 | LOC_Os02g49470 | Os02g0726600 | - | Detail |
| CX2g023944 | 2:27,763,834-27,766,241 | - | C1H2g21836 | C2H2g09813 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| CX2g022260 | 2:27,770,905-27,772,911 | - | C1H2g12455 | C2H2g17575 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| CX2g024123 | 2:27,774,429-27,779,649 | + | C1H2g29396 | C2H2g05996 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| CX2g019961 | 2:27,782,801-27,785,714 | - | C1H2g07912 | C2H2g05669 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| CX2g023170 | 2:27,787,371-27,787,595 | + | C1H2g02472 | C2H2g19256 | LOC_Os02g49550 | Os02g0727700 | - | Detail |
| CX2g019013 | 2:27,798,884-27,799,141 | + | C1H2g05141 | C2H2g25351 | LOC_Os02g49560 | Os02g0728001 | bZIP43 | Detail |
| CX2g021134 | 2:27,800,794-27,808,540 | - | C1H2g01405 | C2H2g28910 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| CX2g022512 | 2:27,810,443-27,813,173 | + | C1H2g31094 | C2H2g03568 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| CX2g020763 | 2:27,817,491-27,820,683 | - | C1H2g01710 | C2H2g04353 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| CX2g020190 | 2:27,824,940-27,827,490 | - | C1H2g15124 | C2H2g01821 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| CX2g023333 | 2:27,827,457-27,830,702 | + | C1H2g22353 | C2H2g11437 | LOC_Os02g49620 | Os02g0728700 | - | Detail |