| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02167 | 3:6,541,432-6,544,627 | - | C2H3g18176 | CX3g030281 | LOC_Os03g13550 | Os03g0238700 | - | Detail |
| C1H3g21099 | 3:6,545,178-6,550,783 | - | C2H3g03887 | CX3g028158 | LOC_Os03g13560 | Os03g0238800 | - | Detail |
| C1H3g04969 | 3:6,556,174-6,559,275 | - | C2H3g08796 | CX3g027800 | LOC_Os03g13570 | Os03g0239000 | - | Detail |
| C1H3g08050 | 3:6,562,731-6,567,002 | + | C2H3g02771 | CX3g025956 | LOC_Os03g13590 | Os03g0239200 | - | Detail |
| C1H3g17605 | 3:6,568,644-6,569,375 | - | C2H3g14398 | CX3g028621 | LOC_Os03g13600 | Os03g0239300 | - | Detail |
| C1H3g02449 | 3:6,573,725-6,582,728 | - | C2H3g26731 | CX3g025599 | LOC_Os03g13614 | Os03g0239400 | - | Detail |
| C1H3g30005 | 3:6,588,137-6,590,770 | + | C2H3g26790 | CX3g025587 | LOC_Os03g13720 | Os03g0240400 | - | Detail |
| C1H3g14777 | 3:6,591,379-6,595,061 | - | C2H3g30457 | CX3g026273 | LOC_Os03g13730 | Os03g0240500 | - | Detail |
| C1H3g24877 | 3:6,596,841-6,598,178 | - | C2H3g18591 | CX3g029557 | LOC_Os03g13740 | Os03g0240600 | OsUPS | Detail |
| C1H3g17490 | 3:6,602,801-6,605,895 | - | C2H3g19605 | CX3g026950 | LOC_Os03g13750 | Os03g0240700 | - | Detail |
| C1H3g10474 | 3:6,606,090-6,608,820 | + | C2H3g24897 | CX3g031005 | LOC_Os03g13760 | Os03g0240800 | - | Detail |
| C1H3g03667 | 3:6,609,830-6,614,428 | - | C2H3g16324 | CX3g025683 | LOC_Os03g13770 | Os03g0240900 | - | Detail |
| C1H3g00374 | 3:6,615,957-6,622,351 | + | C2H3g26862 | CX3g026829 | LOC_Os03g13790 | Os03g0241100 | - | Detail |
| C1H3g07634 | 3:6,623,249-6,624,724 | + | C2H3g04183 | CX3g030938 | LOC_Os03g13800 | Os03g0241200 | - | Detail |
| C1H3g27482 | 3:6,626,585-6,629,491 | + | C2H3g01854 | CX3g029324 | LOC_Os03g13810 | Os03g0241300 | - | Detail |
| C1H3g15084 | 3:6,629,522-6,633,777 | - | C2H3g18795 | CX3g027367 | LOC_Os03g13820 | Os03g0241600 | - | Detail |
| C1H3g00982 | 3:6,642,447-6,645,772 | - | C2H3g10673 | CX3g028625 | LOC_Os03g13830 | Os03g0241800 | - | Detail |
| C1H3g13149 | 3:6,647,504-6,650,857 | - | C2H3g08630 | CX3g028484 | LOC_Os03g13840 | Os03g0241900 | - | Detail |
| C1H3g14890 | 3:6,653,263-6,659,610 | + | C2H3g09453 | - | LOC_Os03g13850 | Os03g0242100 | OsRAD17 | Detail |
| C1H3g22214 | 3:6,661,004-6,664,415 | + | C2H3g09832 | CX3g029755 | LOC_Os03g13860 | Os03g0242200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024533 | 2:27,634,508-27,634,768 | + | C1H2g24233 | C2H2g04081 | LOC_Os02g49160 | Os02g0723400 | - | Detail |
| CX2g024766 | 2:27,635,206-27,635,554 | + | C1H2g18213 | C2H2g20481 | LOC_Os02g49160 | Os02g0817600 | - | Detail |
| CX2g020430 | 2:27,637,142-27,641,313 | - | C1H2g16175 | C2H2g22851 | LOC_Os02g49180 | Os02g0723600 | - | Detail |
| CX2g020353 | 2:27,641,715-27,644,117 | + | C1H2g00870 | C2H2g17164 | LOC_Os02g49190 | Os02g0723700 | - | Detail |
| CX2g020136 | 2:27,645,070-27,645,234 | + | - | - | - | - | - | Detail |
| CX2g020343 | 2:27,646,294-27,647,043 | + | C1H2g08324 | - | LOC_Os02g39850 | Os02g0578500 | - | Detail |
| CX2g023328 | 2:27,662,385-27,664,838 | + | C1H2g20021 | C2H2g00357 | LOC_Os02g49230 | Os02g0724000 | DTH2, OsCCT08, OsBBX7, OsN | Detail |
| CX2g024388 | 2:27,665,573-27,666,289 | - | - | C2H2g07003 | LOC_Os02g49240 | Os02g0724100 | - | Detail |
| CX2g021926 | 2:27,667,275-27,668,117 | - | C1H2g27016 | C2H2g21182 | LOC_Os02g49250 | Os02g0724100 | - | Detail |
| CX2g021258 | 2:27,669,243-27,673,224 | + | C1H2g09863 | C2H2g14057 | LOC_Os02g49260 | Os02g0724500 | - | Detail |
| CX2g020735 | 2:27,674,203-27,678,933 | + | C1H2g24655 | C2H2g00624 | LOC_Os02g49270 | Os02g0724600 | - | Detail |
| CX2g022823 | 2:27,680,422-27,681,017 | - | - | - | LOC_Os02g49280 | - | - | Detail |
| CX2g023008 | 2:27,685,802-27,686,122 | - | - | - | - | - | - | Detail |
| CX2g023532 | 2:27,689,052-27,689,342 | - | - | - | - | Os02g0724850 | - | Detail |
| CX2g024361 | 2:27,690,068-27,692,053 | + | C1H2g20212 | C2H2g05357 | LOC_Os02g49310 | Os02g0725000 | OsAGC6 | Detail |
| CX2g021752 | 2:27,694,332-27,697,657 | - | C1H2g12743 | C2H2g11959 | LOC_Os02g49320 | Os02g0725100 | - | Detail |
| CX2g019231 | 2:27,698,506-27,702,467 | + | C1H2g25813 | C2H2g08115 | LOC_Os02g49326 | Os02g0725200 | - | Detail |
| CX2g023038 | 2:27,703,118-27,706,402 | + | C1H2g14119 | C2H2g27630 | LOC_Os02g49332 | Os02g0725300 | - | Detail |
| CX2g023830 | 2:27,709,916-27,710,646 | - | C1H2g16618 | C2H2g22284 | LOC_Os02g49350 | Os02g0725500 | - | Detail |
| CX2g023625 | 2:27,711,149-27,713,539 | + | C1H2g28453 | C2H2g23242 | LOC_Os02g49360 | Os02g0725600 | - | Detail |