| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g02875 | 4:26,302,924-26,308,851 | - | C2H4g27441 | CX4g033004 | LOC_Os04g51060 | Os02g0700000 | - | Detail |
| C1H4g14973 | 4:26,312,350-26,314,658 | - | C2H4g22306 | CX4g034139 | LOC_Os04g51070 | Os04g0599300 | EAT1, OsbHLH141, EAT1/DTD1, bHLH141, DTD1, DTD | Detail |
| C1H4g26976 | 4:26,320,393-26,326,056 | + | C2H4g03863 | CX4g034652 | LOC_Os04g51080 | Os04g0599400 | - | Detail |
| C1H4g19631 | 4:26,329,325-26,343,393 | + | C2H4g03311 | CX4g033723 | LOC_Os04g51090 | Os04g0599650 | - | Detail |
| C1H4g29659 | 4:26,344,218-26,347,164 | + | C2H4g27597 | CX4g035416 | LOC_Os04g51100 | Os04g0599700 | - | Detail |
| C1H4g20555 | 4:26,347,861-26,350,745 | + | C2H4g20047 | CX4g033831 | LOC_Os04g51110 | Os04g0599800 | CDC20.1 | Detail |
| C1H4g01630 | 4:26,351,212-26,356,239 | + | C2H4g05473 | CX4g035744 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| C1H4g04836 | 4:26,358,923-26,360,679 | + | C2H4g10442 | CX4g035030 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| C1H4g15893 | 4:26,361,500-26,362,604 | - | C2H4g25284 | CX4g035889 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| C1H4g02523 | 4:26,362,851-26,365,153 | - | C2H4g12319 | CX4g035681 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| C1H4g17466 | 4:26,365,907-26,367,375 | - | C2H4g13155 | - | - | - | - | Detail |
| C1H4g06092 | 4:26,367,600-26,368,805 | - | C2H4g13155 | CX4g036218 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| C1H4g28733 | 4:26,370,683-26,372,967 | - | C2H4g11382 | CX4g036257 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| C1H4g27697 | 4:26,373,814-26,374,512 | - | C2H4g16073 | CX4g033183 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| C1H4g04973 | 4:26,374,598-26,379,006 | - | C2H4g16073 | CX4g033183 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| C1H4g07853 | 4:26,386,694-26,391,407 | - | C2H4g00138 | CX4g032625 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| C1H4g08504 | 4:26,392,836-26,396,991 | - | C2H4g09942 | CX4g033956 | LOC_Os04g51190 | Os04g0574500 | - | Detail |
| C1H4g18677 | 4:26,408,952-26,410,318 | - | C2H4g25560 | CX4g032272 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| C1H4g11359 | 4:26,411,776-26,413,423 | - | C2H4g10254 | CX4g033025 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| C1H4g04413 | 4:26,413,308-26,414,261 | + | C2H4g14874 | CX4g034624 | LOC_Os04g51290 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023559 | 2:27,482,580-27,488,207 | + | - | C2H2g05712 | LOC_Os02g48810 | Os02g0720000 | - | Detail |
| CX2g023306 | 2:27,489,831-27,490,456 | - | C1H2g04003 | C2H2g26609 | LOC_Os02g48820 | Os02g0720100 | - | Detail |
| CX2g022662 | 2:27,492,046-27,495,119 | + | C1H2g28119 | C2H2g17849 | LOC_Os02g48830 | Os02g0720200 | - | Detail |
| CX2g023752 | 2:27,496,094-27,498,861 | + | C1H2g04549 | C2H2g12963 | LOC_Os02g48840 | Os02g0720300 | - | Detail |
| CX2g018926 | 2:27,500,267-27,501,157 | + | C1H2g03370 | C2H2g12542 | LOC_Os02g48850 | Os02g0720400 | - | Detail |
| CX2g020411 | 2:27,503,164-27,504,855 | + | C1H2g06652 | C2H2g09168 | LOC_Os02g48860 | Os02g0720500 | - | Detail |
| CX2g020891 | 2:27,506,867-27,508,349 | - | C1H2g20338 | C2H2g25224 | LOC_Os02g48870 | Os02g0720600 | - | Detail |
| CX2g023341 | 2:27,514,936-27,519,639 | - | C1H2g31471 | C2H2g22396 | LOC_Os02g48880 | Os02g0720700 | - | Detail |
| CX2g021948 | 2:27,524,291-27,528,637 | + | C1H2g28436 | C2H2g25425 | LOC_Os02g48900 | Os02g0720900 | - | Detail |
| CX2g024396 | 2:27,532,971-27,533,801 | - | C1H2g09094 | C2H2g11386 | LOC_Os02g48910 | Os02g0721100 | - | Detail |
| CX2g021720 | 2:27,535,491-27,539,864 | - | C1H2g12153 | C2H2g01560 | LOC_Os02g48950 | Os02g0721200 | - | Detail |
| CX2g023863 | 2:27,551,511-27,553,526 | - | C1H2g06282 | C2H2g14813 | LOC_Os02g48980 | Os02g0721700 | - | Detail |
| CX2g019956 | 2:27,555,812-27,560,126 | - | C1H2g28541 | C2H2g03395 | LOC_Os02g48990 | Os02g0721800 | OsSec14-9 | Detail |
| CX2g018869 | 2:27,563,281-27,568,316 | - | C1H2g27760 | C2H2g05054 | LOC_Os02g49030 | Os02g0722001 | - | Detail |
| CX2g022151 | 2:27,569,988-27,572,879 | + | C1H2g15238 | C2H2g07315 | LOC_Os02g49050 | Os02g0722300 | - | Detail |
| CX2g020972 | 2:27,577,249-27,583,699 | + | C1H2g27060 | C2H2g28450 | LOC_Os02g49060 | Os02g0722400 | - | Detail |
| CX2g019945 | 2:27,584,325-27,589,522 | - | C1H2g28181 | C2H2g03918 | LOC_Os02g49070 | Os02g0722500 | - | Detail |
| CX2g020919 | 2:27,599,491-27,603,445 | + | C1H2g28597 | C2H2g17328 | LOC_Os02g49080 | Os02g0722700 | - | Detail |
| CX2g020883 | 2:27,605,323-27,614,106 | - | C1H2g02362 | C2H2g17496 | LOC_Os02g49090 | Os02g0722800 | - | Detail |
| CX2g024558 | 2:27,624,834-27,629,097 | - | C1H2g24734 | C2H2g15860 | LOC_Os02g49150 | Os02g0723300 | - | Detail |