| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00595 | 5:20,255,544-20,257,753 | + | C1H5g12778 | CX5g040097 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| C2H5g23469 | 5:20,260,244-20,261,460 | - | C1H5g22216 | - | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C2H5g15924 | 5:20,261,918-20,262,334 | - | C1H5g05615 | CX5g037795 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C2H5g27372 | 5:20,265,804-20,269,075 | - | C1H5g29364 | CX5g037436 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| C2H5g09500 | 5:20,272,302-20,274,674 | + | C1H5g11382 | CX5g037252 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| C2H5g01943 | 5:20,276,334-20,276,600 | + | C1H5g00326 | CX5g039059 | - | Os05g0489750 | - | Detail |
| C2H5g05322 | 5:20,277,356-20,279,584 | - | C1H5g30374 | CX5g039132 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| C2H5g07453 | 5:20,280,953-20,284,731 | - | C1H5g17926 | CX5g038078 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| C2H5g20839 | 5:20,285,634-20,287,613 | - | C1H5g27285 | CX5g037785 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| C2H5g02383 | 5:20,287,853-20,289,688 | + | C1H5g14042 | CX5g039362 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| C2H5g16191 | 5:20,290,572-20,296,794 | + | C1H5g00258 | CX5g038500 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| C2H5g27761 | 5:20,299,690-20,300,745 | - | C1H5g17707 | CX5g037621 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| C2H5g07017 | 5:20,308,897-20,315,355 | - | C1H5g17579 | CX5g039490 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| C2H5g07145 | 5:20,316,323-20,318,633 | - | C1H5g31086 | CX5g038921 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| C2H5g25171 | 5:20,322,902-20,328,726 | - | C1H5g16631 | CX5g037848 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| C2H5g06467 | 5:20,329,937-20,332,796 | - | C1H5g03177 | CX5g037157 | LOC_Os05g41180 | Os05g0490800 | - | Detail |
| C2H5g15902 | 5:20,336,078-20,336,922 | - | C1H5g04917 | - | LOC_Os05g41190 | Os05g0490900 | - | Detail |
| C2H5g03482 | 5:20,339,026-20,339,554 | - | C1H5g01262 | CX5g040781 | LOC_Os05g41200 | Os05g0491000 | OsCML9 | Detail |
| C2H5g27006 | 5:20,340,490-20,343,661 | - | C1H5g17633 | CX5g040781 | LOC_Os05g41210 | Os05g0491100 | - | Detail |
| C2H5g10562 | 5:20,347,115-20,349,730 | - | C1H5g22455 | CX5g040781 | LOC_Os05g41220 | Os05g0491200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023675 | 2:27,068,972-27,070,060 | + | C1H2g13754 | C2H2g30439 | LOC_Os02g48060 | Os02g0710300 | OsbHLH126, OsRSL2 | Detail |
| CX2g022189 | 2:27,075,685-27,077,972 | + | C1H2g13956 | C2H2g01416 | LOC_Os02g48080 | Os02g0710500 | ECK1 | Detail |
| CX2g022026 | 2:27,083,825-27,086,313 | + | C1H2g03210 | C2H2g08370 | LOC_Os02g48094 | Os02g0710700 | - | Detail |
| CX2g023149 | 2:27,089,537-27,098,677 | + | C1H2g05301 | C2H2g13118 | LOC_Os02g48100 | Os02g0710800 | - | Detail |
| CX2g024784 | 2:27,099,591-27,104,898 | + | C1H2g09617 | C2H2g08570 | LOC_Os02g48110 | Os02g0710900 | - | Detail |
| CX2g022460 | 2:27,106,010-27,113,374 | - | C1H2g14761 | C2H2g28485 | LOC_Os02g48116 | Os02g0711100 | - | Detail |
| CX2g024643 | 2:27,113,500-27,115,652 | + | C1H2g26775 | C2H2g00846 | LOC_Os02g48130 | Os02g0711200 | - | Detail |
| CX2g023318 | 2:27,116,319-27,116,717 | + | C1H2g25781 | C2H2g03294 | LOC_Os02g48140 | Os02g0711300 | - | Detail |
| CX2g023243 | 2:27,123,049-27,123,222 | - | - | - | LOC_Os07g45790 | - | - | Detail |
| CX2g021444 | 2:27,129,387-27,130,504 | - | C1H2g13442 | C2H2g08145 | LOC_Os02g48170 | Os02g0711900 | - | Detail |
| CX2g021406 | 2:27,132,021-27,143,757 | - | C1H2g08711 | C2H2g23525 | - | Os02g0712000 | - | Detail |
| CX2g024547 | 2:27,146,641-27,149,452 | - | C1H2g28287 | C2H2g09849 | LOC_Os02g48190 | Os02g0712500 | - | Detail |
| CX2g019825 | 2:27,153,970-27,154,122 | - | - | - | - | - | - | Detail |
| CX2g024795 | 2:27,155,479-27,158,297 | - | C1H2g10364 | C2H2g05468 | LOC_Os02g48200 | Os02g0712600 | - | Detail |
| CX2g022412 | 2:27,159,782-27,163,028 | - | C1H2g18489 | C2H2g05928 | LOC_Os02g48210 | Os02g0712700 | - | Detail |
| CX2g024378 | 2:27,164,625-27,165,260 | - | C1H2g11223 | C2H2g28663 | LOC_Os02g48220 | Os02g0712800 | - | Detail |
| CX2g021728 | 2:27,172,793-27,173,254 | + | - | C2H2g29966 | LOC_Os02g48280 | Os02g0713250 | - | Detail |
| CX2g022411 | 2:27,175,847-27,178,644 | + | C1H2g02150 | C2H2g05221 | LOC_Os02g48290 | Os02g0713400 | OsNTRB | Detail |
| CX2g019992 | 2:27,179,262-27,179,471 | + | - | - | - | - | - | Detail |
| CX2g023875 | 2:27,180,342-27,182,670 | - | C1H2g04513 | C2H2g14467 | LOC_Os02g48300 | Os02g0713500 | - | Detail |