| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g16030 | 4:20,604,880-20,606,065 | - | C2H4g00702 | CX4g033693 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| C1H4g00073 | 4:20,614,279-20,618,635 | + | C2H4g19420 | CX4g034292 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| C1H4g04352 | 4:20,623,859-20,625,361 | + | C2H4g22876 | CX4g035839 | LOC_Os04g39629 | Os04g0306800 | - | Detail |
| C1H4g27433 | 4:20,627,409-20,631,175 | + | C2H4g22876 | CX4g035839 | LOC_Os04g39629 | Os04g0472400 | - | Detail |
| C1H4g18621 | 4:20,634,438-20,638,146 | + | C2H4g05936 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C1H4g21886 | 4:20,640,550-20,643,687 | + | C2H4g02841 | CX4g035542 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| C1H4g18594 | 4:20,648,275-20,650,781 | - | C2H4g20727 | CX4g031996 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| C1H4g22390 | 4:20,652,338-20,652,839 | - | C2H4g02603 | CX4g036319 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| C1H4g00302 | 4:20,658,721-20,668,640 | - | C2H4g23069 | CX4g034400 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| C1H4g22436 | 4:20,685,532-20,686,945 | - | C2H4g27268 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C1H4g30851 | 4:20,689,258-20,690,068 | - | C2H4g08296 | - | LOC_Os04g39840 | Os04g0474300 | - | Detail |
| C1H4g08294 | 4:20,693,208-20,698,478 | - | C2H4g06810 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C1H4g25243 | 4:20,700,221-20,708,124 | - | C2H4g06498 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C1H4g24332 | 4:20,711,314-20,716,411 | - | C2H4g26901 | - | LOC_Os04g39880 | Os04g0474800 | OsTAGG2, Os4BGlu12 | Detail |
| C1H4g03925 | 4:20,722,945-20,728,104 | - | C2H4g06549 | - | LOC_Os04g39900 | Os04g0474900 | OsTAGG1, Os4BGlu13 | Detail |
| C1H4g27571 | 4:20,730,737-20,733,148 | + | C2H4g15875 | CX4g031592 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| C1H4g19181 | 4:20,737,041-20,739,449 | + | C2H4g18216 | CX4g034833 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| C1H4g08744 | 4:20,740,948-20,743,475 | + | C2H4g26452 | CX4g033183 | LOC_Os04g39940 | Os04g0475250 | - | Detail |
| C1H4g16959 | 4:20,746,009-20,746,536 | - | C2H4g17863 | CX4g035822 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| C1H4g29172 | 4:20,749,146-20,750,381 | - | C2H4g05329 | CX4g033449 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023079 | 2:26,783,342-26,787,298 | - | C1H2g09314 | C2H2g24836 | LOC_Os02g47605 | Os02g0704966 | - | Detail |
| CX2g021450 | 2:26,791,326-26,791,898 | + | - | - | - | Os02g0212975 | - | Detail |
| CX2g020107 | 2:26,792,168-26,793,677 | - | C1H2g07748 | C2H2g07681 | LOC_Os02g47610 | Os02g0705000 | - | Detail |
| CX2g024556 | 2:26,795,560-26,797,455 | - | C1H2g06203 | C2H2g27957 | LOC_Os02g47620 | Os02g0705100 | - | Detail |
| CX2g023714 | 2:26,806,035-26,808,538 | + | C1H2g14377 | C2H2g29851 | LOC_Os02g47640 | Os02g0705300 | - | Detail |
| CX2g023793 | 2:26,810,399-26,814,084 | + | C1H2g30729 | C2H2g26632 | LOC_Os02g47650 | Os02g0705400 | - | Detail |
| CX2g021493 | 2:26,814,400-26,816,249 | - | C1H2g05380 | C2H2g29538 | LOC_Os02g47660 | Os02g0705500 | - | Detail |
| CX2g023023 | 2:26,830,186-26,833,686 | - | C1H2g14367 | C2H2g18272 | LOC_Os02g47670 | Os02g0705600 | - | Detail |
| CX2g024451 | 2:26,839,775-26,839,936 | - | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g021563 | 2:26,845,995-26,847,635 | + | C1H2g10828 | C2H2g28571 | LOC_Os02g47744 | Os02g0706400 | OsRL3 | Detail |
| CX2g019318 | 2:26,852,111-26,857,023 | + | C1H2g26087 | C2H2g17664 | LOC_Os02g47760 | Os02g0706500 | - | Detail |
| CX2g022609 | 2:26,859,821-26,860,950 | - | - | C2H2g26631 | LOC_Os02g47770 | Os02g0706600 | - | Detail |
| CX2g024154 | 2:26,876,341-26,878,350 | - | C1H2g30863 | C2H2g15914 | LOC_Os02g47780 | Os02g0706900 | - | Detail |
| CX2g021599 | 2:26,881,352-26,881,600 | + | C1H2g06070 | - | - | Os02g0707051 | - | Detail |
| CX2g019600 | 2:26,882,185-26,886,033 | - | C1H2g01327 | C2H2g30485 | LOC_Os02g47800 | Os02g0707100 | - | Detail |
| CX2g019647 | 2:26,891,970-26,894,837 | - | C1H2g09874 | C2H2g10798 | LOC_Os02g47810 | Os02g0707200 | OsDOF11 | Detail |
| CX2g020379 | 2:26,906,680-26,907,093 | - | - | - | - | - | - | Detail |
| CX2g020705 | 2:26,909,467-26,910,033 | + | - | C2H2g26136 | LOC_Os02g47830 | Os02g0708000 | - | Detail |
| CX2g022812 | 2:26,910,253-26,915,492 | - | C1H2g06757 | C2H2g24339 | LOC_Os02g47840 | Os02g0707900 | - | Detail |
| CX2g022631 | 2:26,920,433-26,924,379 | + | C1H2g30395 | C2H2g26317 | LOC_Os02g47850 | Os02g0708100 | - | Detail |