| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g00809 | 5:11,982,210-11,984,061 | - | C2H5g18962 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C1H5g07771 | 5:12,001,890-12,004,026 | + | C2H5g16379 | CX5g040926 | LOC_Os05g25600 | Os05g0320300 | - | Detail |
| C1H5g18434 | 5:12,005,370-12,006,031 | + | C2H5g17208 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C1H5g11691 | 5:12,012,645-12,014,131 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g29408 | 5:12,015,766-12,016,554 | - | C2H5g12884 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C1H5g31853 | 5:12,053,670-12,054,445 | + | C2H5g23272 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C1H5g21190 | 5:12,055,039-12,058,391 | + | C2H5g30247 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C1H5g09562 | 5:12,072,384-12,073,544 | + | C2H5g20457 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C1H5g20684 | 5:12,079,618-12,082,497 | + | C2H5g00966 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C1H5g15138 | 5:12,088,755-12,088,970 | - | C2H5g12832 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C1H5g03510 | 5:12,094,616-12,098,484 | + | C2H5g27944 | - | - | - | - | Detail |
| C1H5g02171 | 5:12,094,751-12,098,348 | - | C2H5g23193 | CX5g037938 | - | Os05g0475600 | - | Detail |
| C1H5g07569 | 5:12,110,411-12,114,059 | + | C2H5g25840 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C1H5g09336 | 5:12,115,350-12,119,558 | + | C2H5g02562 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C1H5g18365 | 5:12,121,188-12,122,633 | + | C2H5g29319 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g16408 | 5:12,140,296-12,142,180 | + | C2H5g21674 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C1H5g24963 | 5:12,142,187-12,144,548 | + | C2H5g11879 | CX12g015435 | LOC_Os05g25170 | - | - | Detail |
| C1H5g19700 | 5:12,146,724-12,149,612 | + | C2H5g22294 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C1H5g26142 | 5:12,149,959-12,153,426 | - | C2H5g05113 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C1H5g26115 | 5:12,158,868-12,160,517 | + | C2H5g07422 | CX5g041147 | LOC_Os05g25890 | Os05g0324300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022772 | 2:26,659,637-26,662,591 | + | C1H2g09622 | C2H2g02080 | LOC_Os02g47360 | Os02g0702000 | OSOTP51, SSA1 | Detail |
| CX2g022159 | 2:26,663,167-26,663,499 | - | C1H4g19881 | C2H2g03187 | LOC_Os02g47370 | Os02g0702100 | - | Detail |
| CX2g024105 | 2:26,668,477-26,668,764 | - | - | C2H2g05102 | - | - | - | Detail |
| CX2g019179 | 2:26,669,172-26,672,447 | + | C1H2g18788 | C2H2g00977 | LOC_Os02g47400 | Os02g0702400 | - | Detail |
| CX2g023268 | 2:26,673,853-26,681,807 | - | C1H2g17296 | C2H2g26384 | LOC_Os02g47410 | Os02g0702500 | - | Detail |
| CX2g020864 | 2:26,687,279-26,691,730 | - | C1H2g14738 | C2H2g00034 | LOC_Os02g47420 | Os02g0702600 | - | Detail |
| CX2g019475 | 2:26,701,268-26,701,432 | + | - | - | - | - | - | Detail |
| CX2g020499 | 2:26,702,551-26,708,493 | - | C1H2g23661 | C2H2g04827 | LOC_Os02g47440 | Os02g0702800 | OsSYP21 | Detail |
| CX2g023044 | 2:26,712,436-26,713,260 | + | C1H2g10840 | C2H2g13380 | LOC_Os02g47450 | Os02g0703300 | - | Detail |
| CX2g021944 | 2:26,725,760-26,727,683 | + | C1H2g06866 | C2H2g24088 | LOC_Os02g45280 | Os02g0703600 | OsABA8ox1, CYP707A5 | Detail |
| CX2g023081 | 2:26,737,634-26,738,158 | - | - | C2H2g17501 | LOC_Os02g47490 | Os02g0703800 | - | Detail |
| CX2g022994 | 2:26,739,167-26,741,699 | + | C1H2g27896 | C2H2g26119 | LOC_Os02g47500 | Os02g0703900 | - | Detail |
| CX2g024500 | 2:26,742,595-26,744,427 | + | - | - | - | Os02g0704131 | - | Detail |
| CX2g021592 | 2:26,754,982-26,755,272 | - | - | - | - | - | - | Detail |
| CX2g020240 | 2:26,756,793-26,761,479 | - | C1H2g28522 | C2H2g28790 | LOC_Os02g47560 | Os02g0704300 | OsDNA2_6 | Detail |
| CX2g021465 | 2:26,764,915-26,767,189 | + | C1H2g16636 | C2H2g08817 | LOC_Os02g47570 | Os02g0704500 | - | Detail |
| CX2g023515 | 2:26,768,301-26,770,873 | - | - | C2H2g10092 | LOC_Os02g47580 | Os02g0704600 | - | Detail |
| CX2g019220 | 2:26,773,100-26,775,714 | + | C1H2g06692 | C2H2g14274 | LOC_Os02g47590 | Os02g0704800 | - | Detail |
| CX2g024385 | 2:26,777,105-26,779,317 | - | C1H2g18129 | C2H2g01483 | LOC_Os02g47600 | Os02g0704900 | - | Detail |
| CX2g022976 | 2:26,777,494-26,778,154 | + | C1H2g28400 | - | - | Os02g0704933 | - | Detail |