| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g16415 | 4:16,680,819-16,683,225 | + | C1H4g05012 | CX4g032937 | LOC_Os04g32660 | Os04g0398500 | - | Detail |
| C2H4g00377 | 4:16,685,637-16,688,441 | + | C1H4g28546 | CX4g033047 | LOC_Os04g32670 | Os04g0398600 | - | Detail |
| C2H4g14149 | 4:16,688,728-16,689,417 | - | C1H4g21316 | CX4g032973 | LOC_Os04g32680 | Os04g0398700 | - | Detail |
| C2H4g19288 | 4:16,691,600-16,705,738 | - | C1H4g20511 | CX4g032900 | LOC_Os04g32690 | Os04g0398800 | - | Detail |
| C2H4g10637 | 4:16,709,171-16,712,369 | + | C1H4g08073 | CX4g032898 | LOC_Os04g32710 | Os04g0399000 | - | Detail |
| C2H4g00186 | 4:16,719,550-16,722,777 | + | C1H4g26028 | CX4g035881 | LOC_Os04g32740 | Os04g0399300 | - | Detail |
| C2H4g03270 | 4:16,752,671-16,755,530 | - | C1H4g21348 | - | LOC_Os04g32800 | Os04g0400000 | - | Detail |
| C2H4g06368 | 4:16,756,251-16,756,596 | - | C1H4g06656 | - | - | Os04g0400000 | - | Detail |
| C2H4g21932 | 4:16,758,823-16,760,269 | - | C1H4g27942 | - | - | Os04g0572100 | - | Detail |
| C2H4g02618 | 4:16,776,503-16,777,991 | - | C1H4g05223 | - | LOC_Os04g32810 | Os04g0400000 | - | Detail |
| C2H4g22891 | 4:16,783,201-16,784,093 | - | C1H4g21891 | - | LOC_Os04g32820 | Os04g0400700 | - | Detail |
| C2H4g07833 | 4:16,785,737-16,786,556 | - | C1H4g02047 | - | LOC_Os04g32830 | Os04g0400700 | - | Detail |
| C2H4g00763 | 4:16,790,488-16,791,568 | - | C1H4g29317 | - | LOC_Os04g32840 | Os04g0400800 | - | Detail |
| C2H4g16334 | 4:16,801,987-16,804,816 | - | C1H4g17092 | - | LOC_Os04g32850 | Os04g0401000 | - | Detail |
| C2H4g26185 | 4:16,808,317-16,808,955 | - | C1H4g28791 | - | LOC_Os04g32860 | Os04g0401100 | - | Detail |
| C2H4g06643 | 4:16,818,523-16,826,437 | - | C1H4g19844 | CX4g036045 | LOC_Os04g32880 | Os04g0401300 | - | Detail |
| C2H4g15513 | 4:16,830,948-16,835,549 | - | - | CX4g033343 | - | - | - | Detail |
| C2H4g23329 | 4:16,849,362-16,854,724 | + | C1H4g01351 | CX4g035031 | LOC_Os04g32920 | Os04g0401700 | - | Detail |
| C2H4g07669 | 4:16,856,857-16,859,766 | - | C1H4g00308 | CX4g032032 | LOC_Os04g32930 | Os04g0401800 | OsSnm1 | Detail |
| C2H4g08341 | 4:16,862,071-16,867,821 | - | C1H4g06913 | CX4g033022 | LOC_Os04g32940 | Os04g0401900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024576 | 2:26,538,284-26,541,157 | + | C1H2g18165 | C2H2g10795 | LOC_Os02g47130 | Os02g0699500 | - | Detail |
| CX2g023032 | 2:26,542,067-26,542,813 | + | - | C2H2g17991 | LOC_Os02g47140 | Os02g0699600 | - | Detail |
| CX2g023323 | 2:26,546,268-26,553,181 | - | C1H2g01131 | C2H2g13651 | LOC_Os02g47150 | Os02g0699700 | - | Detail |
| CX2g019844 | 2:26,560,518-26,561,072 | - | - | - | - | Os02g0699800 | - | Detail |
| CX2g020652 | 2:26,565,890-26,566,762 | + | - | C2H2g05050 | LOC_Os02g47160 | Os02g0699900 | - | Detail |
| CX2g020522 | 2:26,567,946-26,571,916 | - | C1H2g31566 | C2H2g29805 | LOC_Os02g47170 | Os02g0700000 | - | Detail |
| CX2g022377 | 2:26,572,873-26,573,040 | + | - | - | - | - | - | Detail |
| CX2g019762 | 2:26,575,583-26,577,343 | + | C1H2g13530 | C2H2g18839 | LOC_Os02g47180 | Os02g0700100 | CDC20.2 | Detail |
| CX2g019985 | 2:26,581,603-26,584,011 | + | C1H2g07096 | C2H2g00990 | LOC_Os02g47190 | Os02g0700300 | - | Detail |
| CX2g018946 | 2:26,584,959-26,586,291 | - | C1H2g17263 | C2H2g18781 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| CX2g022668 | 2:26,588,672-26,590,150 | - | C1H2g20817 | C2H2g13276 | LOC_Os02g47210 | Os02g0700500 | OsPUT1, PUT1 | Detail |
| CX2g022172 | 2:26,593,369-26,593,521 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g021133 | 2:26,596,060-26,598,894 | + | C1H2g05464 | C2H2g21592 | LOC_Os02g47220 | Os02g0700600 | - | Detail |
| CX2g022517 | 2:26,602,275-26,605,925 | - | C1H2g24987 | C2H2g02395 | LOC_Os02g47230 | Os02g0700700 | OsBRXL1, OsBRXL2 | Detail |
| CX2g022082 | 2:26,621,407-26,624,665 | - | C1H2g25791 | C2H2g25196 | LOC_Os02g47280 | Os02g0701300 | GS2, OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2 | Detail |
| CX2g021662 | 2:26,642,919-26,643,152 | + | - | - | - | - | - | Detail |
| CX2g023957 | 2:26,646,917-26,649,868 | + | C1H2g27039 | C2H2g15528 | LOC_Os02g47310 | Os02g0701600 | - | Detail |
| CX2g020103 | 2:26,651,848-26,654,065 | - | C1H2g16179 | C2H2g23415 | LOC_Os02g47320 | Os04g0601700 | - | Detail |
| CX2g021360 | 2:26,655,222-26,656,831 | + | C1H2g12582 | C2H2g21402 | LOC_Os02g47350 | Os02g0701900 | - | Detail |
| CX2g019776 | 2:26,658,070-26,658,294 | + | - | - | - | - | - | Detail |