| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g17764 | 2:16,383,359-16,384,768 | + | C1H2g17511 | CX2g024525 | LOC_Os02g28340 | Os02g0485000 | - | Detail |
| C2H2g19393 | 2:16,408,550-16,410,770 | - | C1H2g19424 | - | - | - | - | Detail |
| C2H2g27926 | 2:16,443,788-16,447,280 | + | C1H2g15604 | CX2g020358 | LOC_Os02g28580 | Os02g0487300 | - | Detail |
| C2H2g16337 | 2:16,470,195-16,472,328 | + | C1H2g04842 | CX2g020358 | LOC_Os02g28660 | Os02g0487300 | - | Detail |
| C2H2g28503 | 2:16,480,601-16,482,393 | + | C1H2g29692 | CX2g019368 | LOC_Os02g28680 | Os02g0487300 | - | Detail |
| C2H2g13549 | 2:16,490,753-16,494,448 | - | C1H2g25610 | CX2g019609 | LOC_Os02g28720 | Os02g0488600 | - | Detail |
| C2H2g09159 | 2:16,526,872-16,529,420 | + | C1H2g24376 | CX2g019939 | LOC_Os02g28810 | Os02g0489400 | - | Detail |
| C2H2g07433 | 2:16,531,250-16,534,663 | + | C1H2g28295 | CX2g021075 | LOC_Os02g28820 | Os02g0489500 | - | Detail |
| C2H2g29338 | 2:16,535,522-16,547,844 | - | C1H2g07614 | CX2g022951 | LOC_Os02g28830 | Os02g0489550 | - | Detail |
| C2H2g10751 | 2:16,561,956-16,569,651 | + | C1H2g03753 | CX2g022420 | LOC_Os02g28850 | Os02g0489800 | - | Detail |
| C2H2g23190 | 2:16,571,593-16,572,016 | + | C1H2g30410 | - | - | - | - | Detail |
| C2H2g28147 | 2:16,572,313-16,572,666 | + | C1H2g18528 | CX2g020775 | - | - | - | Detail |
| C2H2g14694 | 2:16,573,416-16,576,582 | + | C1H2g12378 | CX2g024603 | LOC_Os02g28870 | Os02g0490000 | OsPUB73 | Detail |
| C2H2g19151 | 2:16,592,116-16,594,178 | + | C1H2g31655 | CX2g020830 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| C2H2g16996 | 2:16,599,152-16,600,759 | - | C1H2g05275 | CX2g022060 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| C2H2g26220 | 2:16,602,987-16,603,998 | + | - | CX2g020042 | - | - | - | Detail |
| C2H2g25066 | 2:16,625,275-16,626,849 | + | C1H2g10622 | CX2g024900 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| C2H2g22171 | 2:16,655,454-16,659,558 | - | C1H2g23595 | CX2g022120 | LOC_Os02g28980 | Os02g0491400 | rFKBP75 | Detail |
| C2H2g20082 | 2:16,677,034-16,677,843 | - | C1H2g19165 | CX2g019698 | LOC_Os02g29000 | Os02g0491600 | - | Detail |
| C2H2g19644 | 2:16,679,269-16,680,029 | + | C1H2g09173 | CX2g023919 | LOC_Os02g29010 | Os02g0491700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024576 | 2:26,538,284-26,541,157 | + | C1H2g18165 | C2H2g10795 | LOC_Os02g47130 | Os02g0699500 | - | Detail |
| CX2g023032 | 2:26,542,067-26,542,813 | + | - | C2H2g17991 | LOC_Os02g47140 | Os02g0699600 | - | Detail |
| CX2g023323 | 2:26,546,268-26,553,181 | - | C1H2g01131 | C2H2g13651 | LOC_Os02g47150 | Os02g0699700 | - | Detail |
| CX2g019844 | 2:26,560,518-26,561,072 | - | - | - | - | Os02g0699800 | - | Detail |
| CX2g020652 | 2:26,565,890-26,566,762 | + | - | C2H2g05050 | LOC_Os02g47160 | Os02g0699900 | - | Detail |
| CX2g020522 | 2:26,567,946-26,571,916 | - | C1H2g31566 | C2H2g29805 | LOC_Os02g47170 | Os02g0700000 | - | Detail |
| CX2g022377 | 2:26,572,873-26,573,040 | + | - | - | - | - | - | Detail |
| CX2g019762 | 2:26,575,583-26,577,343 | + | C1H2g13530 | C2H2g18839 | LOC_Os02g47180 | Os02g0700100 | CDC20.2 | Detail |
| CX2g019985 | 2:26,581,603-26,584,011 | + | C1H2g07096 | C2H2g00990 | LOC_Os02g47190 | Os02g0700300 | - | Detail |
| CX2g018946 | 2:26,584,959-26,586,291 | - | C1H2g17263 | C2H2g18781 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| CX2g022668 | 2:26,588,672-26,590,150 | - | C1H2g20817 | C2H2g13276 | LOC_Os02g47210 | Os02g0700500 | OsPUT1, PUT1 | Detail |
| CX2g022172 | 2:26,593,369-26,593,521 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g021133 | 2:26,596,060-26,598,894 | + | C1H2g05464 | C2H2g21592 | LOC_Os02g47220 | Os02g0700600 | - | Detail |
| CX2g022517 | 2:26,602,275-26,605,925 | - | C1H2g24987 | C2H2g02395 | LOC_Os02g47230 | Os02g0700700 | OsBRXL1, OsBRXL2 | Detail |
| CX2g022082 | 2:26,621,407-26,624,665 | - | C1H2g25791 | C2H2g25196 | LOC_Os02g47280 | Os02g0701300 | GS2, OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2 | Detail |
| CX2g021662 | 2:26,642,919-26,643,152 | + | - | - | - | - | - | Detail |
| CX2g023957 | 2:26,646,917-26,649,868 | + | C1H2g27039 | C2H2g15528 | LOC_Os02g47310 | Os02g0701600 | - | Detail |
| CX2g020103 | 2:26,651,848-26,654,065 | - | C1H2g16179 | C2H2g23415 | LOC_Os02g47320 | Os04g0601700 | - | Detail |
| CX2g021360 | 2:26,655,222-26,656,831 | + | C1H2g12582 | C2H2g21402 | LOC_Os02g47350 | Os02g0701900 | - | Detail |
| CX2g019776 | 2:26,658,070-26,658,294 | + | - | - | - | - | - | Detail |