| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g10516 | 12:2,097,293-2,100,359 | + | C1H12g05368 | CX12g018278 | LOC_Os12g05090 | Os12g0145500 | - | Detail |
| C2H12g04534 | 12:2,101,361-2,103,983 | + | C1H12g27500 | CX12g018616 | LOC_Os11g05100 | Os11g0148400 | - | Detail |
| C2H12g14726 | 12:2,104,489-2,108,906 | - | C1H12g17220 | CX12g018156 | LOC_Os12g05110 | Os12g0145700 | OsPK4 | Detail |
| C2H12g30566 | 12:2,110,748-2,113,577 | - | C1H12g13628 | CX12g015785 | LOC_Os12g05120 | Os12g0145900 | - | Detail |
| C2H12g15061 | 12:2,129,184-2,129,997 | - | C1H12g01108 | CX12g018716 | LOC_Os12g05170 | Os12g0146400 | - | Detail |
| C2H12g20480 | 12:2,131,857-2,133,593 | - | C1H12g25187 | CX12g018292 | LOC_Os12g05180 | Os12g0146500 | - | Detail |
| C2H12g30172 | 12:2,150,204-2,153,441 | + | C1H12g12080 | CX12g016051 | LOC_Os12g05200 | Os12g0147000 | OsAHL20 | Detail |
| C2H12g07258 | 12:2,158,020-2,160,962 | + | C1H12g00004 | CX12g017200 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| C2H12g29923 | 12:2,178,030-2,178,466 | + | C1H12g27513 | CX12g018143 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| C2H12g11473 | 12:2,203,529-2,215,178 | - | C1H12g14632 | CX12g015934 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| C2H12g12632 | 12:2,222,037-2,227,386 | + | C1H12g24063 | CX12g016883 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| C2H12g01567 | 12:2,228,214-2,229,835 | - | C1H12g15447 | CX12g015209 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| C2H12g09179 | 12:2,243,156-2,245,868 | + | C1H12g30747 | CX12g016510 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| C2H12g13534 | 12:2,251,928-2,252,254 | - | C1H12g27311 | CX12g017610 | LOC_Os12g05370 | Os11g0150450 | - | Detail |
| C2H12g10982 | 12:2,263,731-2,267,991 | + | C1H12g27756 | CX12g016333 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| C2H12g22641 | 12:2,272,005-2,273,264 | + | C1H12g08261 | CX12g018469 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| C2H12g14618 | 12:2,273,478-2,277,140 | - | C1H12g16772 | CX12g015371 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| C2H12g10067 | 12:2,319,816-2,321,539 | - | C1H12g16085 | CX12g018115 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| C2H12g10170 | 12:2,329,305-2,332,042 | + | C1H12g07376 | CX12g016582 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| C2H12g01016 | 12:2,345,051-2,351,786 | + | C1H12g16450 | - | - | Os12g0151900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024576 | 2:26,538,284-26,541,157 | + | C1H2g18165 | C2H2g10795 | LOC_Os02g47130 | Os02g0699500 | - | Detail |
| CX2g023032 | 2:26,542,067-26,542,813 | + | - | C2H2g17991 | LOC_Os02g47140 | Os02g0699600 | - | Detail |
| CX2g023323 | 2:26,546,268-26,553,181 | - | C1H2g01131 | C2H2g13651 | LOC_Os02g47150 | Os02g0699700 | - | Detail |
| CX2g019844 | 2:26,560,518-26,561,072 | - | - | - | - | Os02g0699800 | - | Detail |
| CX2g020652 | 2:26,565,890-26,566,762 | + | - | C2H2g05050 | LOC_Os02g47160 | Os02g0699900 | - | Detail |
| CX2g020522 | 2:26,567,946-26,571,916 | - | C1H2g31566 | C2H2g29805 | LOC_Os02g47170 | Os02g0700000 | - | Detail |
| CX2g022377 | 2:26,572,873-26,573,040 | + | - | - | - | - | - | Detail |
| CX2g019762 | 2:26,575,583-26,577,343 | + | C1H2g13530 | C2H2g18839 | LOC_Os02g47180 | Os02g0700100 | CDC20.2 | Detail |
| CX2g019985 | 2:26,581,603-26,584,011 | + | C1H2g07096 | C2H2g00990 | LOC_Os02g47190 | Os02g0700300 | - | Detail |
| CX2g018946 | 2:26,584,959-26,586,291 | - | C1H2g17263 | C2H2g18781 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| CX2g022668 | 2:26,588,672-26,590,150 | - | C1H2g20817 | C2H2g13276 | LOC_Os02g47210 | Os02g0700500 | OsPUT1, PUT1 | Detail |
| CX2g022172 | 2:26,593,369-26,593,521 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g021133 | 2:26,596,060-26,598,894 | + | C1H2g05464 | C2H2g21592 | LOC_Os02g47220 | Os02g0700600 | - | Detail |
| CX2g022517 | 2:26,602,275-26,605,925 | - | C1H2g24987 | C2H2g02395 | LOC_Os02g47230 | Os02g0700700 | OsBRXL1, OsBRXL2 | Detail |
| CX2g022082 | 2:26,621,407-26,624,665 | - | C1H2g25791 | C2H2g25196 | LOC_Os02g47280 | Os02g0701300 | GS2, OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2 | Detail |
| CX2g021662 | 2:26,642,919-26,643,152 | + | - | - | - | - | - | Detail |
| CX2g023957 | 2:26,646,917-26,649,868 | + | C1H2g27039 | C2H2g15528 | LOC_Os02g47310 | Os02g0701600 | - | Detail |
| CX2g020103 | 2:26,651,848-26,654,065 | - | C1H2g16179 | C2H2g23415 | LOC_Os02g47320 | Os04g0601700 | - | Detail |
| CX2g021360 | 2:26,655,222-26,656,831 | + | C1H2g12582 | C2H2g21402 | LOC_Os02g47350 | Os02g0701900 | - | Detail |
| CX2g019776 | 2:26,658,070-26,658,294 | + | - | - | - | - | - | Detail |