| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00465 | 4:21,949,305-21,949,736 | - | C1H4g16892 | - | LOC_Os04g42850 | - | - | Detail |
| C2H4g23428 | 4:21,955,992-21,961,795 | + | C1H4g02011 | CX4g033250 | LOC_Os04g42860 | Os04g0507700 | - | Detail |
| C2H4g12434 | 4:21,962,396-21,964,296 | - | C1H4g25437 | CX4g036242 | LOC_Os04g42870 | Os04g0507800 | - | Detail |
| C2H4g04255 | 4:21,964,471-21,966,166 | + | C1H4g05518 | CX4g032853 | LOC_Os04g42880 | Os04g0507900 | - | Detail |
| C2H4g13577 | 4:21,969,979-21,970,602 | - | - | CX4g035638 | LOC_Os04g42889 | - | - | Detail |
| C2H4g02916 | 4:21,971,608-21,974,671 | - | C1H4g12307 | CX4g033139 | LOC_Os04g42900 | Os04g0508000 | - | Detail |
| C2H4g04232 | 4:21,975,336-21,978,353 | + | C1H4g06876 | CX4g032690 | LOC_Os04g42910 | Os04g0508100 | - | Detail |
| C2H4g05860 | 4:21,979,292-21,984,831 | + | C1H4g08533 | CX4g033875 | LOC_Os04g42920 | Os04g0508200 | - | Detail |
| C2H4g05577 | 4:21,986,204-21,988,757 | + | C1H4g17316 | CX4g035105 | LOC_Os04g42930 | Os04g0508300 | OsGrxC2.2 | Detail |
| C2H4g08577 | 4:21,989,395-21,990,537 | - | - | CX4g036552 | LOC_Os04g42940 | Os04g0508400 | - | Detail |
| C2H4g24307 | 4:21,993,729-21,995,690 | - | C1H4g28976 | CX4g036081 | LOC_Os04g42950 | Os04g0508500 | Os2R_MYB45 | Detail |
| C2H4g01800 | 4:22,005,104-22,006,447 | + | C1H2g19268 | CX4g034855 | LOC_Os04g42960 | Os04g0508600 | - | Detail |
| C2H4g15606 | 4:22,010,532-22,014,498 | - | C1H4g09744 | CX4g031554 | LOC_Os04g42980 | Os04g0508800 | - | Detail |
| C2H4g18756 | 4:22,019,614-22,023,317 | - | C1H4g09860 | CX4g035042 | LOC_Os04g42990 | Os04g0508900 | - | Detail |
| C2H4g21092 | 4:22,032,568-22,038,012 | + | C1H4g03726 | CX4g031481 | LOC_Os04g43020 | Os04g0509000 | - | Detail |
| C2H4g17989 | 4:22,038,821-22,046,565 | + | C1H4g25656 | CX4g035238 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g25209 | 4:22,046,130-22,049,928 | - | C1H4g05629 | CX4g036052 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| C2H4g20441 | 4:22,052,563-22,073,010 | - | C1H4g11981 | CX4g034232 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| C2H4g11339 | 4:22,075,791-22,076,232 | + | C1H4g16776 | CX4g036588 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| C2H4g01906 | 4:22,082,684-22,084,180 | + | C1H4g16652 | CX2g024932 | LOC_Os04g43070 | Os04g0509600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023711 | 2:26,386,162-26,386,410 | + | C1H2g28254 | C2H2g15500 | LOC_Os02g46839 | Os02g0695700 | - | Detail |
| CX2g022785 | 2:26,386,892-26,392,664 | - | C1H2g02703 | C2H2g15458 | LOC_Os02g46850 | Os02g0695800 | - | Detail |
| CX2g023312 | 2:26,393,204-26,393,356 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g022117 | 2:26,403,099-26,404,995 | + | C1H2g13360 | C2H2g12937 | LOC_Os02g46910 | Os02g0696500 | - | Detail |
| CX2g024061 | 2:26,405,485-26,405,658 | - | - | - | - | - | - | Detail |
| CX2g020990 | 2:26,414,822-26,420,313 | + | C1H2g30720 | C2H2g26485 | LOC_Os02g46930 | Os02g0696700 | JMJ707 | Detail |
| CX2g022564 | 2:26,427,761-26,432,547 | + | C1H2g01605 | C2H2g08332 | LOC_Os02g46940 | Os02g0696900 | - | Detail |
| CX2g024745 | 2:26,442,339-26,445,262 | + | C1H2g00090 | C2H2g01904 | LOC_Os02g46956 | Os02g0697200 | - | Detail |
| CX2g022468 | 2:26,446,611-26,450,139 | + | C1H2g12534 | C2H2g16657 | LOC_Os02g46962 | Os02g0697300 | - | Detail |
| CX2g023465 | 2:26,451,079-26,454,892 | - | C1H2g06035 | C2H2g27000 | LOC_Os02g46970 | Os02g0697400 | 4CL2, Os4CL2 | Detail |
| CX2g020256 | 2:26,456,813-26,458,755 | - | C1H2g11528 | C2H2g05522 | LOC_Os02g46980 | Os02g0697500 | - | Detail |
| CX2g021170 | 2:26,462,050-26,466,271 | + | C1H2g31638 | C2H2g00397 | LOC_Os02g46990 | Os02g0697600 | - | Detail |
| CX2g022742 | 2:26,467,427-26,468,800 | - | C1H2g04653 | C2H2g14923 | LOC_Os02g47000 | Os02g0697700 | - | Detail |
| CX2g021805 | 2:26,469,293-26,472,360 | + | C1H2g09723 | C2H2g29054 | LOC_Os02g47010 | Os02g0697800 | - | Detail |
| CX2g024307 | 2:26,474,231-26,476,218 | + | C1H2g14448 | C2H2g27677 | LOC_Os02g47020 | Os02g0698000 | - | Detail |
| CX2g021243 | 2:26,477,267-26,478,415 | - | C1H2g18534 | C2H2g18315 | LOC_Os02g47030 | Os02g0698100 | - | Detail |
| CX2g024217 | 2:26,493,514-26,497,600 | + | C1H2g02655 | C2H2g18843 | LOC_Os02g47060 | Os02g0698800 | - | Detail |
| CX2g023002 | 2:26,517,915-26,520,524 | + | C1H2g03123 | C2H2g14858 | LOC_Os02g47090 | Os02g0699000 | OsNPF7.2 | Detail |
| CX2g021504 | 2:26,525,161-26,527,942 | + | C1H2g20162 | C2H2g19221 | LOC_Os02g47110 | Os02g0699300 | - | Detail |
| CX2g024335 | 2:26,529,714-26,536,406 | + | C1H2g00453 | C2H2g09814 | LOC_Os02g47120 | Os02g0699400 | RSH3c | Detail |