| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g17952 | 11:1,609,839-1,610,426 | + | C2H11g06832 | CX11g014863 | LOC_Os12g04360 | Os11g0141400 | - | Detail |
| C1H11g11783 | 11:1,612,622-1,617,436 | - | C2H11g05590 | CX11g013264 | LOC_Os11g04570 | Os11g0141500 | - | Detail |
| C1H11g20784 | 11:1,626,556-1,629,355 | + | C2H11g04411 | CX11g013882 | LOC_Os11g04600 | Os11g0141900 | OsBOP2, NH5 | Detail |
| C1H11g21384 | 11:1,642,470-1,643,860 | + | C2H11g25781 | CX11g013509 | LOC_Os11g04660 | Os11g0142400 | - | Detail |
| C1H11g18499 | 11:1,646,307-1,652,072 | + | C2H11g09115 | CX11g011239 | LOC_Os11g04670 | Os11g0142500 | OsIPMS1 | Detail |
| C1H11g06875 | 11:1,661,894-1,665,032 | - | C2H12g06757 | CX11g011829 | LOC_Os11g04710 | Os11g0143200 | OsCPD1, CYP90A3, OsCPD1/CYP90A3 | Detail |
| C1H11g13552 | 11:1,668,502-1,670,105 | + | C2H11g05956 | CX11g012154 | LOC_Os11g04720 | Os11g0143300 | OSRR9, OsRR9, A-type RR | Detail |
| C1H11g20131 | 11:1,674,645-1,684,260 | - | C2H11g05899 | CX11g012125 | LOC_Os11g04740 | Os11g0143500 | - | Detail |
| C1H11g30834 | 11:1,684,543-1,685,763 | + | C2H11g08039 | CX11g013032 | LOC_Os11g04750 | Os11g0143600 | - | Detail |
| C1H11g10034 | 11:1,687,648-1,689,027 | - | C2H11g21620 | CX11g013076 | LOC_Os11g04760 | Os11g0143700 | - | Detail |
| C1H11g23225 | 11:1,690,026-1,690,325 | + | C2H12g08204 | CX11g012793 | LOC_Os11g04770 | Os11g0141400 | - | Detail |
| C1H11g19404 | 11:1,691,441-1,691,812 | + | C2H12g06925 | CX11g012793 | LOC_Os12g04570 | Os11g0144500 | - | Detail |
| C1H11g09971 | 11:1,692,643-1,692,951 | + | C2H12g08204 | CX11g012793 | LOC_Os11g04770 | Os11g0141400 | - | Detail |
| C1H11g19129 | 11:1,705,398-1,708,061 | + | C2H11g27777 | CX11g011186 | LOC_Os11g04830 | Os11g0144900 | - | Detail |
| C1H11g05659 | 11:1,708,812-1,712,638 | - | C2H11g14012 | CX11g013599 | LOC_Os11g04840 | Os11g0145000 | - | Detail |
| C1H11g09875 | 11:1,715,093-1,715,863 | - | C2H11g00679 | CX11g013962 | LOC_Os11g04850 | Os11g0145100 | - | Detail |
| C1H11g07081 | 11:1,717,207-1,718,694 | - | C2H11g19618 | CX11g011751 | LOC_Os11g04860 | Os11g0145200 | - | Detail |
| C1H11g05178 | 11:1,725,999-1,726,220 | + | C2H11g12348 | CX11g013310 | LOC_Os11g04880 | Os11g0145400 | OsUBL5.2 | Detail |
| C1H11g11818 | 11:1,728,978-1,731,707 | + | C2H11g03418 | CX11g011320 | LOC_Os11g04890 | Os11g0145700 | - | Detail |
| C1H11g20406 | 11:1,732,709-1,734,407 | - | C2H11g03421 | CX11g013204 | LOC_Os11g04935 | Os11g0146550 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023711 | 2:26,386,162-26,386,410 | + | C1H2g28254 | C2H2g15500 | LOC_Os02g46839 | Os02g0695700 | - | Detail |
| CX2g022785 | 2:26,386,892-26,392,664 | - | C1H2g02703 | C2H2g15458 | LOC_Os02g46850 | Os02g0695800 | - | Detail |
| CX2g023312 | 2:26,393,204-26,393,356 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g022117 | 2:26,403,099-26,404,995 | + | C1H2g13360 | C2H2g12937 | LOC_Os02g46910 | Os02g0696500 | - | Detail |
| CX2g024061 | 2:26,405,485-26,405,658 | - | - | - | - | - | - | Detail |
| CX2g020990 | 2:26,414,822-26,420,313 | + | C1H2g30720 | C2H2g26485 | LOC_Os02g46930 | Os02g0696700 | JMJ707 | Detail |
| CX2g022564 | 2:26,427,761-26,432,547 | + | C1H2g01605 | C2H2g08332 | LOC_Os02g46940 | Os02g0696900 | - | Detail |
| CX2g024745 | 2:26,442,339-26,445,262 | + | C1H2g00090 | C2H2g01904 | LOC_Os02g46956 | Os02g0697200 | - | Detail |
| CX2g022468 | 2:26,446,611-26,450,139 | + | C1H2g12534 | C2H2g16657 | LOC_Os02g46962 | Os02g0697300 | - | Detail |
| CX2g023465 | 2:26,451,079-26,454,892 | - | C1H2g06035 | C2H2g27000 | LOC_Os02g46970 | Os02g0697400 | 4CL2, Os4CL2 | Detail |
| CX2g020256 | 2:26,456,813-26,458,755 | - | C1H2g11528 | C2H2g05522 | LOC_Os02g46980 | Os02g0697500 | - | Detail |
| CX2g021170 | 2:26,462,050-26,466,271 | + | C1H2g31638 | C2H2g00397 | LOC_Os02g46990 | Os02g0697600 | - | Detail |
| CX2g022742 | 2:26,467,427-26,468,800 | - | C1H2g04653 | C2H2g14923 | LOC_Os02g47000 | Os02g0697700 | - | Detail |
| CX2g021805 | 2:26,469,293-26,472,360 | + | C1H2g09723 | C2H2g29054 | LOC_Os02g47010 | Os02g0697800 | - | Detail |
| CX2g024307 | 2:26,474,231-26,476,218 | + | C1H2g14448 | C2H2g27677 | LOC_Os02g47020 | Os02g0698000 | - | Detail |
| CX2g021243 | 2:26,477,267-26,478,415 | - | C1H2g18534 | C2H2g18315 | LOC_Os02g47030 | Os02g0698100 | - | Detail |
| CX2g024217 | 2:26,493,514-26,497,600 | + | C1H2g02655 | C2H2g18843 | LOC_Os02g47060 | Os02g0698800 | - | Detail |
| CX2g023002 | 2:26,517,915-26,520,524 | + | C1H2g03123 | C2H2g14858 | LOC_Os02g47090 | Os02g0699000 | OsNPF7.2 | Detail |
| CX2g021504 | 2:26,525,161-26,527,942 | + | C1H2g20162 | C2H2g19221 | LOC_Os02g47110 | Os02g0699300 | - | Detail |
| CX2g024335 | 2:26,529,714-26,536,406 | + | C1H2g00453 | C2H2g09814 | LOC_Os02g47120 | Os02g0699400 | RSH3c | Detail |