| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30409 | 6:18,342,460-18,351,804 | + | C2H6g09581 | CX6g044312 | LOC_Os06g36080 | Os06g0554700 | - | Detail |
| C1H6g12887 | 6:18,352,318-18,365,457 | - | C2H6g20811 | CX6g044731 | LOC_Os06g36090 | Os06g0554800 | - | Detail |
| C1H6g18940 | 6:18,379,612-18,383,047 | + | C2H6g19558 | CX6g045470 | LOC_Os06g36160 | Os06g0555400 | - | Detail |
| C1H6g27356 | 6:18,383,853-18,387,163 | - | C2H6g01553 | CX6g041699 | LOC_Os06g36170 | Os06g0555500 | - | Detail |
| C1H6g25734 | 6:18,396,642-18,399,434 | - | C2H6g08197 | CX6g045859 | LOC_Os04g55280 | Os04g0646000 | - | Detail |
| C1H6g05986 | 6:18,400,477-18,401,920 | - | C2H6g02285 | CX6g041977 | LOC_Os01g63890 | Os04g0646100 | - | Detail |
| C1H6g09123 | 6:18,421,362-18,430,205 | + | C2H6g03125 | CX6g044183 | LOC_Os06g36180 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g31088 | 6:18,451,454-18,455,209 | + | C2H6g24860 | CX6g044183 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g04383 | 6:18,455,547-18,456,599 | + | C2H6g20565 | CX6g042707 | LOC_Os06g36210 | Os06g0556000 | OsAAP12A, AAP12A, OsAAP3, AAP3 | Detail |
| C1H6g20721 | 6:18,459,013-18,463,635 | - | C2H6g04951 | CX6g043932 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g19530 | 6:18,464,830-18,470,493 | - | C2H6g00925 | CX6g043875 | LOC_Os06g36220 | Os06g0556300 | - | Detail |
| C1H6g25463 | 6:18,477,053-18,477,663 | + | C2H6g03428 | CX6g045462 | LOC_Os06g36240 | Os06g0556600 | - | Detail |
| C1H6g05440 | 6:18,500,814-18,502,005 | - | C2H6g00804 | - | - | - | - | Detail |
| C1H6g14762 | 6:18,521,513-18,526,151 | + | C2H6g20088 | CX6g045760 | LOC_Os06g36270 | Os06g0557100 | - | Detail |
| C1H6g25128 | 6:18,567,862-18,568,770 | + | C2H6g28947 | CX6g045760 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g06230 | 6:18,575,227-18,575,826 | + | C2H6g11791 | CX6g042210 | LOC_Os06g36320 | Os06g0557700 | - | Detail |
| C1H6g05685 | 6:18,630,560-18,637,243 | - | C2H6g27740 | CX6g043607 | LOC_Os06g36360 | Os06g0558766 | - | Detail |
| C1H6g20753 | 6:18,660,671-18,661,952 | + | C2H6g07116 | CX6g041768 | LOC_Os06g36390 | Os06g0559400 | - | Detail |
| C1H6g11485 | 6:18,662,491-18,665,569 | - | C2H6g12142 | CX6g043353 | LOC_Os06g36400 | Os06g0559500 | - | Detail |
| C1H6g21786 | 6:18,671,291-18,673,620 | - | C2H6g13654 | CX6g043474 | LOC_Os06g36450 | Os06g0560000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023711 | 2:26,386,162-26,386,410 | + | C1H2g28254 | C2H2g15500 | LOC_Os02g46839 | Os02g0695700 | - | Detail |
| CX2g022785 | 2:26,386,892-26,392,664 | - | C1H2g02703 | C2H2g15458 | LOC_Os02g46850 | Os02g0695800 | - | Detail |
| CX2g023312 | 2:26,393,204-26,393,356 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g022117 | 2:26,403,099-26,404,995 | + | C1H2g13360 | C2H2g12937 | LOC_Os02g46910 | Os02g0696500 | - | Detail |
| CX2g024061 | 2:26,405,485-26,405,658 | - | - | - | - | - | - | Detail |
| CX2g020990 | 2:26,414,822-26,420,313 | + | C1H2g30720 | C2H2g26485 | LOC_Os02g46930 | Os02g0696700 | JMJ707 | Detail |
| CX2g022564 | 2:26,427,761-26,432,547 | + | C1H2g01605 | C2H2g08332 | LOC_Os02g46940 | Os02g0696900 | - | Detail |
| CX2g024745 | 2:26,442,339-26,445,262 | + | C1H2g00090 | C2H2g01904 | LOC_Os02g46956 | Os02g0697200 | - | Detail |
| CX2g022468 | 2:26,446,611-26,450,139 | + | C1H2g12534 | C2H2g16657 | LOC_Os02g46962 | Os02g0697300 | - | Detail |
| CX2g023465 | 2:26,451,079-26,454,892 | - | C1H2g06035 | C2H2g27000 | LOC_Os02g46970 | Os02g0697400 | 4CL2, Os4CL2 | Detail |
| CX2g020256 | 2:26,456,813-26,458,755 | - | C1H2g11528 | C2H2g05522 | LOC_Os02g46980 | Os02g0697500 | - | Detail |
| CX2g021170 | 2:26,462,050-26,466,271 | + | C1H2g31638 | C2H2g00397 | LOC_Os02g46990 | Os02g0697600 | - | Detail |
| CX2g022742 | 2:26,467,427-26,468,800 | - | C1H2g04653 | C2H2g14923 | LOC_Os02g47000 | Os02g0697700 | - | Detail |
| CX2g021805 | 2:26,469,293-26,472,360 | + | C1H2g09723 | C2H2g29054 | LOC_Os02g47010 | Os02g0697800 | - | Detail |
| CX2g024307 | 2:26,474,231-26,476,218 | + | C1H2g14448 | C2H2g27677 | LOC_Os02g47020 | Os02g0698000 | - | Detail |
| CX2g021243 | 2:26,477,267-26,478,415 | - | C1H2g18534 | C2H2g18315 | LOC_Os02g47030 | Os02g0698100 | - | Detail |
| CX2g024217 | 2:26,493,514-26,497,600 | + | C1H2g02655 | C2H2g18843 | LOC_Os02g47060 | Os02g0698800 | - | Detail |
| CX2g023002 | 2:26,517,915-26,520,524 | + | C1H2g03123 | C2H2g14858 | LOC_Os02g47090 | Os02g0699000 | OsNPF7.2 | Detail |
| CX2g021504 | 2:26,525,161-26,527,942 | + | C1H2g20162 | C2H2g19221 | LOC_Os02g47110 | Os02g0699300 | - | Detail |
| CX2g024335 | 2:26,529,714-26,536,406 | + | C1H2g00453 | C2H2g09814 | LOC_Os02g47120 | Os02g0699400 | RSH3c | Detail |