| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g30000 | 3:24,727,098-24,735,048 | + | C1H3g05229 | CX3g028555 | LOC_Os03g47650 | Os03g0680200 | - | Detail |
| C2H3g05641 | 3:24,737,471-24,745,485 | + | C1H3g13838 | CX3g028555 | LOC_Os03g47670 | Os03g0680300 | - | Detail |
| C2H3g16174 | 3:24,748,253-24,754,694 | + | C1H3g07032 | - | LOC_Os03g47686 | Os03g0680500 | - | Detail |
| C2H3g06201 | 3:24,755,119-24,756,969 | + | - | - | LOC_Os03g47686 | Os03g0680400 | - | Detail |
| C2H3g24906 | 3:24,758,009-24,764,884 | + | C1H3g02531 | CX3g028555 | LOC_Os03g47693 | Os03g0680500 | - | Detail |
| C2H3g17718 | 3:24,767,734-24,768,058 | + | C1H3g13838 | - | LOC_Os03g47686 | - | - | Detail |
| C2H3g04836 | 3:24,768,537-24,775,769 | + | C1H3g22508 | CX3g028555 | LOC_Os03g47686 | Os03g0680566 | - | Detail |
| C2H3g07526 | 3:24,778,083-24,778,532 | + | C1H3g02531 | CX12g018578 | LOC_Os03g47720 | Os03g0680500 | - | Detail |
| C2H3g27910 | 3:24,786,487-24,789,159 | + | C1H3g24845 | CX12g015685 | LOC_Os03g47720 | Os03g0680600 | - | Detail |
| C2H3g27015 | 3:24,792,639-24,792,969 | + | C1H3g22508 | CX3g028555 | LOC_Os03g47720 | Os03g0680600 | - | Detail |
| C2H3g05036 | 3:24,794,682-24,797,211 | - | C1H3g15008 | CX3g027869 | LOC_Os03g47730 | Os03g0680700 | - | Detail |
| C2H3g11834 | 3:24,801,331-24,807,292 | - | C1H3g03715 | CX3g029265 | LOC_Os03g47740 | Os03g0680800 | - | Detail |
| C2H3g10722 | 3:24,829,798-24,852,069 | + | C1H3g12498 | CX3g028531 | LOC_Os03g47760 | Os03g0681300 | - | Detail |
| C2H3g08660 | 3:24,853,088-24,857,726 | - | C1H3g24402 | CX3g025611 | LOC_Os03g47770 | Os03g0681400 | - | Detail |
| C2H3g06154 | 3:24,860,049-24,863,827 | + | C1H3g21990 | CX3g025413 | LOC_Os03g47780 | Os03g0681700 | OsWD40-81, OsLST8, LST8 | Detail |
| C2H3g08631 | 3:24,865,349-24,870,632 | - | C1H3g03027 | CX3g030716 | LOC_Os03g47790 | Os03g0681800 | - | Detail |
| C2H3g29470 | 3:24,885,502-24,889,319 | - | C1H3g11959 | CX3g030858 | LOC_Os03g47800 | Os03g0681900 | - | Detail |
| C2H3g25886 | 3:24,892,240-24,893,102 | - | C1H3g05321 | CX3g025153 | - | - | - | Detail |
| C2H3g14407 | 3:24,905,055-24,913,044 | - | C1H3g19741 | CX3g029458 | LOC_Os03g47820 | Os03g0682200 | - | Detail |
| C2H3g27803 | 3:24,926,547-24,930,573 | - | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020680 | 2:25,809,765-25,811,833 | - | C1H2g09245 | C2H2g15805 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| CX2g020917 | 2:25,827,289-25,828,627 | - | C1H2g27536 | C2H2g05663 | LOC_Os02g45850 | Os02g0683500 | RAV6 | Detail |
| CX2g022945 | 2:25,830,164-25,830,454 | - | - | - | - | - | - | Detail |
| CX2g024060 | 2:25,852,962-25,854,205 | + | C1H2g11065 | C2H2g10983 | - | Os02g0530100 | - | Detail |
| CX2g019047 | 2:25,856,079-25,858,661 | + | C1H2g05780 | C2H2g09919 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| CX2g019917 | 2:25,859,313-25,860,011 | + | C1H2g17371 | C2H2g19834 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| CX2g022909 | 2:25,865,179-25,865,385 | + | - | - | - | - | - | Detail |
| CX2g024566 | 2:25,867,238-25,867,387 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g020719 | 2:25,868,105-25,869,184 | - | C1H2g00614 | C2H2g12350 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| CX2g020860 | 2:25,878,078-25,881,801 | - | C1H2g03932 | C2H2g27051 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| CX2g021780 | 2:25,885,525-25,889,406 | + | C1H2g09273 | C2H2g04078 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| CX2g023573 | 2:25,890,257-25,890,903 | - | C1H2g23248 | C2H2g07890 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| CX2g023547 | 2:25,895,799-25,896,110 | - | C1H2g07518 | C2H2g23208 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| CX2g023866 | 2:25,896,670-25,899,767 | + | C1H2g17890 | C2H2g03417 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| CX2g019320 | 2:25,900,389-25,901,309 | + | C1H2g27881 | C2H2g24497 | - | - | - | Detail |
| CX2g022270 | 2:25,907,128-25,907,450 | - | - | - | LOC_Os02g45974 | Os02g0684800 | - | Detail |
| CX2g023375 | 2:25,908,566-25,914,085 | + | C1H2g27343 | C2H2g17403 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| CX2g019726 | 2:25,924,813-25,927,237 | - | C1H2g24305 | C2H2g27686 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| CX2g020744 | 2:25,935,896-25,936,969 | + | - | - | - | - | - | Detail |
| CX2g023473 | 2:25,938,575-25,941,122 | - | C1H2g27920 | C2H2g27892 | LOC_Os02g46080 | Os02g0685600 | - | Detail |