| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05938 | 1:34,992,964-34,993,498 | - | C1H1g22460 | CX1g000171 | LOC_Os01g68104 | Os01g0909150 | - | Detail |
| C2H1g23470 | 1:34,994,808-35,005,267 | - | C1H1g21604 | CX1g001307 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| C2H1g03983 | 1:35,006,920-35,010,520 | + | C1H1g09277 | CX1g000844 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| C2H1g01807 | 1:35,019,499-35,027,545 | - | C1H1g09218 | CX1g001897 | LOC_Os01g68160 | Os01g0909500 | - | Detail |
| C2H1g08346 | 1:35,046,236-35,049,405 | - | - | - | - | - | - | Detail |
| C2H1g10702 | 1:35,049,348-35,051,799 | + | - | - | - | Os01g0910300 | - | Detail |
| C2H1g20920 | 1:35,058,063-35,061,523 | + | C1H1g04879 | CX1g003036 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| C2H1g26270 | 1:35,062,135-35,063,433 | - | C1H1g17800 | CX1g005194 | - | Os01g0910500 | - | Detail |
| C2H1g25905 | 1:35,076,672-35,079,197 | - | C1H1g25320 | CX1g002099 | LOC_Os01g68310 | Os01g0911000 | - | Detail |
| C2H1g09546 | 1:35,080,356-35,084,550 | - | C1H1g12270 | CX1g001970 | LOC_Os01g68320 | Os01g0911100 | - | Detail |
| C2H1g26092 | 1:35,085,896-35,092,363 | + | C1H1g28018 | CX1g005611 | LOC_Os01g68324 | Os01g0911200 | - | Detail |
| C2H1g20198 | 1:35,093,055-35,097,563 | - | C1H1g15073 | CX1g006627 | LOC_Os01g68330 | Os01g0911300 | OsABCB24 | Detail |
| C2H1g28665 | 1:35,099,796-35,103,240 | - | - | - | - | - | - | Detail |
| C2H1g13016 | 1:35,107,996-35,111,430 | - | C1H1g05271 | CX1g003857 | LOC_Os01g68370 | Os01g0911700 | - | Detail |
| C2H1g08337 | 1:35,115,233-35,122,090 | + | C1H1g30427 | CX1g000675 | LOC_Os01g68380 | Os01g0911800 | - | Detail |
| C2H1g12867 | 1:35,122,398-35,127,164 | - | C1H1g22874 | CX1g002890 | LOC_Os01g68390 | Os01g0911900 | - | Detail |
| C2H1g05404 | 1:35,133,150-35,133,935 | + | C1H1g22265 | CX1g000734 | LOC_Os01g68420 | Os01g0912400 | - | Detail |
| C2H1g23756 | 1:35,135,793-35,139,696 | + | C1H1g21619 | CX1g000160 | LOC_Os01g68440 | Os01g0912600 | - | Detail |
| C2H1g28134 | 1:35,140,332-35,142,282 | + | C1H1g25658 | CX1g001438 | LOC_Os01g68450 | Os01g0912700 | - | Detail |
| C2H1g22864 | 1:35,145,247-35,146,130 | + | C1H1g27519 | CX1g003568 | LOC_Os01g68480 | Os01g0913000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020680 | 2:25,809,765-25,811,833 | - | C1H2g09245 | C2H2g15805 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| CX2g020917 | 2:25,827,289-25,828,627 | - | C1H2g27536 | C2H2g05663 | LOC_Os02g45850 | Os02g0683500 | RAV6 | Detail |
| CX2g022945 | 2:25,830,164-25,830,454 | - | - | - | - | - | - | Detail |
| CX2g024060 | 2:25,852,962-25,854,205 | + | C1H2g11065 | C2H2g10983 | - | Os02g0530100 | - | Detail |
| CX2g019047 | 2:25,856,079-25,858,661 | + | C1H2g05780 | C2H2g09919 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| CX2g019917 | 2:25,859,313-25,860,011 | + | C1H2g17371 | C2H2g19834 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| CX2g022909 | 2:25,865,179-25,865,385 | + | - | - | - | - | - | Detail |
| CX2g024566 | 2:25,867,238-25,867,387 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g020719 | 2:25,868,105-25,869,184 | - | C1H2g00614 | C2H2g12350 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| CX2g020860 | 2:25,878,078-25,881,801 | - | C1H2g03932 | C2H2g27051 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| CX2g021780 | 2:25,885,525-25,889,406 | + | C1H2g09273 | C2H2g04078 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| CX2g023573 | 2:25,890,257-25,890,903 | - | C1H2g23248 | C2H2g07890 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| CX2g023547 | 2:25,895,799-25,896,110 | - | C1H2g07518 | C2H2g23208 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| CX2g023866 | 2:25,896,670-25,899,767 | + | C1H2g17890 | C2H2g03417 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| CX2g019320 | 2:25,900,389-25,901,309 | + | C1H2g27881 | C2H2g24497 | - | - | - | Detail |
| CX2g022270 | 2:25,907,128-25,907,450 | - | - | - | LOC_Os02g45974 | Os02g0684800 | - | Detail |
| CX2g023375 | 2:25,908,566-25,914,085 | + | C1H2g27343 | C2H2g17403 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| CX2g019726 | 2:25,924,813-25,927,237 | - | C1H2g24305 | C2H2g27686 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| CX2g020744 | 2:25,935,896-25,936,969 | + | - | - | - | - | - | Detail |
| CX2g023473 | 2:25,938,575-25,941,122 | - | C1H2g27920 | C2H2g27892 | LOC_Os02g46080 | Os02g0685600 | - | Detail |