| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g09390 | 5:17,051,029-17,054,248 | - | C2H5g19210 | CX5g039042 | LOC_Os05g35060 | Os05g0424800 | - | Detail |
| C1H5g14947 | 5:17,057,704-17,063,427 | - | C2H5g11670 | CX5g037394 | LOC_Os05g35070 | Os05g0425000 | - | Detail |
| C1H5g10575 | 5:17,077,097-17,077,447 | + | - | - | - | - | - | Detail |
| C1H5g09442 | 5:17,078,786-17,082,651 | + | C2H5g20022 | CX5g040956 | LOC_Os05g35110 | Os05g0425700 | - | Detail |
| C1H5g28152 | 5:17,092,647-17,093,486 | + | C2H5g25486 | CX5g038358 | LOC_Os05g35140 | Os05g0426000 | OsSWEET1b | Detail |
| C1H5g25816 | 5:17,093,819-17,095,725 | + | C2H5g16085 | CX5g040098 | LOC_Os05g35160 | Os05g0426100 | - | Detail |
| C1H5g10910 | 5:17,096,707-17,100,879 | - | C2H5g06015 | CX5g039886 | LOC_Os05g35170 | Os05g0426200 | IDEF2 | Detail |
| C1H5g26456 | 5:17,105,425-17,109,092 | + | C2H5g25451 | CX5g040670 | LOC_Os05g35190 | Os05g0426300 | - | Detail |
| C1H5g31800 | 5:17,109,217-17,114,916 | - | C2H5g25115 | CX5g040243 | LOC_Os05g35200 | Os05g0426400 | - | Detail |
| C1H5g30451 | 5:17,143,902-17,145,671 | + | C2H5g27233 | CX5g037277 | LOC_Os05g35230 | Os05g0426800 | - | Detail |
| C1H5g08438 | 5:17,148,312-17,148,887 | + | C2H5g06354 | CX5g037288 | LOC_Os05g35240 | Os05g0426900 | - | Detail |
| C1H5g22553 | 5:17,152,110-17,154,768 | + | C2H5g02568 | CX5g040123 | LOC_Os05g35260 | Os05g0427100 | - | Detail |
| C1H5g07626 | 5:17,158,050-17,164,574 | - | C2H5g20250 | CX5g037167 | LOC_Os05g35266 | Os05g0427200 | - | Detail |
| C1H5g08356 | 5:17,166,839-17,168,989 | - | C2H5g08943 | CX5g036951 | LOC_Os05g35290 | Os05g0427400 | - | Detail |
| C1H5g09774 | 5:17,177,354-17,180,551 | - | C2H5g12313 | CX5g040179 | LOC_Os05g26902 | Os05g0427900 | - | Detail |
| C1H5g05769 | 5:17,184,686-17,184,901 | - | C2H5g19904 | CX5g038636 | LOC_Os05g35350 | Os05g0428000 | - | Detail |
| C1H5g30475 | 5:17,187,027-17,199,424 | - | C2H5g10232 | CX5g041033 | LOC_Os05g35360 | Os05g0428100 | - | Detail |
| C1H5g21222 | 5:17,205,303-17,207,844 | - | C2H5g07719 | CX5g038421 | LOC_Os05g35380 | Os05g0428400 | - | Detail |
| C1H5g31639 | 5:17,220,432-17,222,477 | - | C2H5g26795 | CX5g037691 | LOC_Os05g35400 | Os05g0428600 | OsBiP4 | Detail |
| C1H5g14970 | 5:17,223,922-17,230,046 | - | C2H5g29329 | CX5g039770 | LOC_Os05g35410 | Os05g0428700 | OsAKT2, OsK3.1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020680 | 2:25,809,765-25,811,833 | - | C1H2g09245 | C2H2g15805 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| CX2g020917 | 2:25,827,289-25,828,627 | - | C1H2g27536 | C2H2g05663 | LOC_Os02g45850 | Os02g0683500 | RAV6 | Detail |
| CX2g022945 | 2:25,830,164-25,830,454 | - | - | - | - | - | - | Detail |
| CX2g024060 | 2:25,852,962-25,854,205 | + | C1H2g11065 | C2H2g10983 | - | Os02g0530100 | - | Detail |
| CX2g019047 | 2:25,856,079-25,858,661 | + | C1H2g05780 | C2H2g09919 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| CX2g019917 | 2:25,859,313-25,860,011 | + | C1H2g17371 | C2H2g19834 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| CX2g022909 | 2:25,865,179-25,865,385 | + | - | - | - | - | - | Detail |
| CX2g024566 | 2:25,867,238-25,867,387 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g020719 | 2:25,868,105-25,869,184 | - | C1H2g00614 | C2H2g12350 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| CX2g020860 | 2:25,878,078-25,881,801 | - | C1H2g03932 | C2H2g27051 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| CX2g021780 | 2:25,885,525-25,889,406 | + | C1H2g09273 | C2H2g04078 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| CX2g023573 | 2:25,890,257-25,890,903 | - | C1H2g23248 | C2H2g07890 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| CX2g023547 | 2:25,895,799-25,896,110 | - | C1H2g07518 | C2H2g23208 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| CX2g023866 | 2:25,896,670-25,899,767 | + | C1H2g17890 | C2H2g03417 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| CX2g019320 | 2:25,900,389-25,901,309 | + | C1H2g27881 | C2H2g24497 | - | - | - | Detail |
| CX2g022270 | 2:25,907,128-25,907,450 | - | - | - | LOC_Os02g45974 | Os02g0684800 | - | Detail |
| CX2g023375 | 2:25,908,566-25,914,085 | + | C1H2g27343 | C2H2g17403 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| CX2g019726 | 2:25,924,813-25,927,237 | - | C1H2g24305 | C2H2g27686 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| CX2g020744 | 2:25,935,896-25,936,969 | + | - | - | - | - | - | Detail |
| CX2g023473 | 2:25,938,575-25,941,122 | - | C1H2g27920 | C2H2g27892 | LOC_Os02g46080 | Os02g0685600 | - | Detail |