| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24767 | 1:31,286,368-31,288,410 | - | C2H1g26804 | CX1g004254 | LOC_Os01g60860 | Os01g0823900 | OsPUB3 | Detail |
| C1H1g23645 | 1:31,311,540-31,312,747 | + | C2H1g17727 | CX1g003469 | LOC_Os01g60900 | Os01g0824500 | OsEPFL9 | Detail |
| C1H1g13975 | 1:31,314,041-31,316,857 | + | C2H1g23198 | - | - | - | - | Detail |
| C1H1g18869 | 1:31,316,975-31,321,221 | + | C2H1g04173 | CX1g002737 | LOC_Os01g60910 | Os01g0824600 | - | Detail |
| C1H1g11676 | 1:31,325,052-31,326,511 | + | C2H1g16723 | CX1g003180 | LOC_Os01g60920 | Os01g0824700 | - | Detail |
| C1H1g20864 | 1:31,329,181-31,331,565 | + | C2H1g02718 | CX1g006995 | LOC_Os01g60930 | Os01g0824800 | - | Detail |
| C1H1g01275 | 1:31,333,008-31,333,688 | + | C2H1g05149 | CX1g005075 | LOC_Os01g60940 | Os01g0824900 | - | Detail |
| C1H1g30844 | 1:31,338,832-31,339,973 | + | C2H1g11166 | CX1g007134 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| C1H1g30975 | 1:31,357,035-31,359,303 | - | C2H1g11491 | CX1g003391 | LOC_Os01g61010 | Os01g0825500 | - | Detail |
| C1H1g04795 | 1:31,368,102-31,372,421 | - | C2H1g13725 | CX1g004445 | LOC_Os01g61030 | Os01g0825700 | - | Detail |
| C1H1g30003 | 1:31,374,374-31,380,144 | - | C2H1g15106 | CX1g002793 | LOC_Os01g61044 | Os01g0825800 | - | Detail |
| C1H1g26464 | 1:31,382,208-31,383,731 | + | C2H1g08505 | CX1g003706 | LOC_Os01g61060 | Os01g0825900 | - | Detail |
| C1H1g18090 | 1:31,384,234-31,384,675 | + | C2H1g08505 | CX1g003706 | LOC_Os01g61070 | Os01g0826000 | OsATX | Detail |
| C1H1g02547 | 1:31,402,255-31,404,413 | + | C2H1g27828 | CX1g004814 | LOC_Os01g61080 | Os01g0826400 | OsWRKY24 | Detail |
| C1H1g25773 | 1:31,408,290-31,408,805 | - | C2H1g30286 | CX1g003105 | LOC_Os05g39710 | Os01g0826800 | - | Detail |
| C1H1g20253 | 1:31,416,064-31,421,141 | - | C2H1g22369 | CX1g004110 | LOC_Os01g61120 | Os01g0826900 | - | Detail |
| C1H1g11730 | 1:31,422,389-31,426,099 | - | C2H1g22962 | CX1g005102 | LOC_Os01g61150 | Os01g0827200 | - | Detail |
| C1H1g13234 | 1:31,428,490-31,431,015 | + | C2H1g11237 | CX1g005055 | LOC_Os01g61160 | Os01g0827300 | OsChI1 | Detail |
| C1H1g28329 | 1:31,432,857-31,433,525 | - | C2H1g22870 | CX1g000110 | LOC_Os01g61170 | Os01g0827400 | - | Detail |
| C1H1g29263 | 1:31,434,440-31,438,149 | + | C2H1g27943 | CX1g001550 | LOC_Os01g61180 | Os01g0827500 | OsExo70B1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020680 | 2:25,809,765-25,811,833 | - | C1H2g09245 | C2H2g15805 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| CX2g020917 | 2:25,827,289-25,828,627 | - | C1H2g27536 | C2H2g05663 | LOC_Os02g45850 | Os02g0683500 | RAV6 | Detail |
| CX2g022945 | 2:25,830,164-25,830,454 | - | - | - | - | - | - | Detail |
| CX2g024060 | 2:25,852,962-25,854,205 | + | C1H2g11065 | C2H2g10983 | - | Os02g0530100 | - | Detail |
| CX2g019047 | 2:25,856,079-25,858,661 | + | C1H2g05780 | C2H2g09919 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| CX2g019917 | 2:25,859,313-25,860,011 | + | C1H2g17371 | C2H2g19834 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| CX2g022909 | 2:25,865,179-25,865,385 | + | - | - | - | - | - | Detail |
| CX2g024566 | 2:25,867,238-25,867,387 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g020719 | 2:25,868,105-25,869,184 | - | C1H2g00614 | C2H2g12350 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| CX2g020860 | 2:25,878,078-25,881,801 | - | C1H2g03932 | C2H2g27051 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| CX2g021780 | 2:25,885,525-25,889,406 | + | C1H2g09273 | C2H2g04078 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| CX2g023573 | 2:25,890,257-25,890,903 | - | C1H2g23248 | C2H2g07890 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| CX2g023547 | 2:25,895,799-25,896,110 | - | C1H2g07518 | C2H2g23208 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| CX2g023866 | 2:25,896,670-25,899,767 | + | C1H2g17890 | C2H2g03417 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| CX2g019320 | 2:25,900,389-25,901,309 | + | C1H2g27881 | C2H2g24497 | - | - | - | Detail |
| CX2g022270 | 2:25,907,128-25,907,450 | - | - | - | LOC_Os02g45974 | Os02g0684800 | - | Detail |
| CX2g023375 | 2:25,908,566-25,914,085 | + | C1H2g27343 | C2H2g17403 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| CX2g019726 | 2:25,924,813-25,927,237 | - | C1H2g24305 | C2H2g27686 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| CX2g020744 | 2:25,935,896-25,936,969 | + | - | - | - | - | - | Detail |
| CX2g023473 | 2:25,938,575-25,941,122 | - | C1H2g27920 | C2H2g27892 | LOC_Os02g46080 | Os02g0685600 | - | Detail |