| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g18131 | 6:391,033-396,097 | + | C2H6g01137 | CX6g045797 | LOC_Os06g02019 | Os06g0110000 | KAO | Detail |
| C1H6g28448 | 6:397,430-401,406 | + | C2H6g04108 | CX6g044545 | LOC_Os06g02028 | Os06g0110100 | - | Detail |
| C1H6g25783 | 6:411,336-411,904 | + | C2H6g22524 | CX6g042012 | - | Os06g0113150 | - | Detail |
| C1H6g02561 | 6:412,626-435,074 | + | C2H6g22524 | CX6g042012 | LOC_Os06g02260 | Os06g0112800 | - | Detail |
| C1H6g31753 | 6:441,929-443,136 | - | C2H6g13845 | CX6g045486 | LOC_Os06g02250 | Os06g0112700 | Os2R_MYB62 | Detail |
| C1H6g11536 | 6:460,097-462,430 | - | C2H6g04392 | CX6g044536 | LOC_Os06g02240 | Os06g0112400 | - | Detail |
| C1H6g02471 | 6:463,838-465,754 | - | C2H6g09602 | CX6g044772 | LOC_Os06g02230 | Os06g0112300 | - | Detail |
| C1H6g21798 | 6:466,535-469,481 | - | C2H6g15025 | CX6g044628 | LOC_Os06g02220 | Os06g0112200 | OsMTN | Detail |
| C1H6g09154 | 6:473,900-474,517 | + | C2H6g02993 | CX6g041233 | - | - | - | Detail |
| C1H6g17853 | 6:474,633-476,915 | + | C2H6g16206 | CX6g041233 | - | - | - | Detail |
| C1H6g29129 | 6:479,770-482,818 | + | C2H6g26488 | CX6g041538 | LOC_Os06g02210 | Os06g0112100 | - | Detail |
| C1H6g18928 | 6:484,000-486,204 | - | C2H6g12380 | CX6g041296 | LOC_Os06g02200 | Os06g0112000 | OsPPR16 | Detail |
| C1H6g00969 | 6:497,151-502,324 | + | C2H6g20294 | CX6g042016 | LOC_Os06g02180 | Os06g0111800 | - | Detail |
| C1H6g19887 | 6:505,784-515,471 | - | C2H6g13585 | CX6g044612 | LOC_Os06g02160 | Os06g0111600 | - | Detail |
| C1H6g16131 | 6:516,045-521,095 | - | C2H6g03047 | CX6g041812 | LOC_Os06g02144 | Os06g0111500 | - | Detail |
| C1H6g13996 | 6:522,030-528,673 | + | C2H6g08506 | CX6g044661 | LOC_Os06g02130 | Os06g0111400 | - | Detail |
| C1H6g00113 | 6:529,053-533,147 | + | C2H6g13540 | CX6g043917 | LOC_Os06g02120 | Os06g0111300 | - | Detail |
| C1H6g02069 | 6:534,269-536,386 | - | C2H6g05993 | CX6g042857 | LOC_Os06g02110 | Os06g0111200 | - | Detail |
| C1H6g31788 | 6:536,470-539,080 | + | C2H6g18606 | CX6g042122 | LOC_Os06g02100 | Os06g0111100 | - | Detail |
| C1H6g30079 | 6:555,021-559,558 | - | C2H6g23089 | CX6g043841 | LOC_Os06g02370 | Os06g0113900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020680 | 2:25,809,765-25,811,833 | - | C1H2g09245 | C2H2g15805 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| CX2g020917 | 2:25,827,289-25,828,627 | - | C1H2g27536 | C2H2g05663 | LOC_Os02g45850 | Os02g0683500 | RAV6 | Detail |
| CX2g022945 | 2:25,830,164-25,830,454 | - | - | - | - | - | - | Detail |
| CX2g024060 | 2:25,852,962-25,854,205 | + | C1H2g11065 | C2H2g10983 | - | Os02g0530100 | - | Detail |
| CX2g019047 | 2:25,856,079-25,858,661 | + | C1H2g05780 | C2H2g09919 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| CX2g019917 | 2:25,859,313-25,860,011 | + | C1H2g17371 | C2H2g19834 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| CX2g022909 | 2:25,865,179-25,865,385 | + | - | - | - | - | - | Detail |
| CX2g024566 | 2:25,867,238-25,867,387 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g020719 | 2:25,868,105-25,869,184 | - | C1H2g00614 | C2H2g12350 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| CX2g020860 | 2:25,878,078-25,881,801 | - | C1H2g03932 | C2H2g27051 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| CX2g021780 | 2:25,885,525-25,889,406 | + | C1H2g09273 | C2H2g04078 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| CX2g023573 | 2:25,890,257-25,890,903 | - | C1H2g23248 | C2H2g07890 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| CX2g023547 | 2:25,895,799-25,896,110 | - | C1H2g07518 | C2H2g23208 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| CX2g023866 | 2:25,896,670-25,899,767 | + | C1H2g17890 | C2H2g03417 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| CX2g019320 | 2:25,900,389-25,901,309 | + | C1H2g27881 | C2H2g24497 | - | - | - | Detail |
| CX2g022270 | 2:25,907,128-25,907,450 | - | - | - | LOC_Os02g45974 | Os02g0684800 | - | Detail |
| CX2g023375 | 2:25,908,566-25,914,085 | + | C1H2g27343 | C2H2g17403 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| CX2g019726 | 2:25,924,813-25,927,237 | - | C1H2g24305 | C2H2g27686 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| CX2g020744 | 2:25,935,896-25,936,969 | + | - | - | - | - | - | Detail |
| CX2g023473 | 2:25,938,575-25,941,122 | - | C1H2g27920 | C2H2g27892 | LOC_Os02g46080 | Os02g0685600 | - | Detail |