| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24459 | 2:1,495,230-1,498,367 | + | C2H2g01875 | CX2g022118 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| C1H2g13894 | 2:1,501,498-1,508,193 | - | C2H2g19732 | CX2g019313 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| C1H2g25126 | 2:1,513,815-1,514,207 | - | - | CX2g023899 | - | - | - | Detail |
| C1H2g29540 | 2:1,518,426-1,518,683 | + | - | CX2g022522 | LOC_Os02g03880 | Os02g0131600 | - | Detail |
| C1H2g05041 | 2:1,519,692-1,523,049 | - | C2H2g21277 | CX2g020563 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| C1H2g18848 | 2:1,524,789-1,528,602 | - | C2H2g13835 | CX2g019095 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| C1H2g00924 | 2:1,532,795-1,537,571 | - | C2H2g22540 | CX2g019802 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| C1H2g01456 | 2:1,538,000-1,541,517 | - | C2H2g12575 | CX2g018957 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| C1H2g17223 | 2:1,546,073-1,548,934 | + | C2H2g02428 | CX2g021626 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| C1H2g04467 | 2:1,560,120-1,560,732 | - | C2H2g10653 | CX2g021994 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| C1H2g04799 | 2:1,572,574-1,581,526 | - | C2H2g24972 | CX2g024093 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| C1H2g29927 | 2:1,597,014-1,599,940 | - | C2H2g13962 | CX2g021970 | LOC_Os02g03990 | - | - | Detail |
| C1H2g20335 | 2:1,603,995-1,607,745 | - | C2H2g19617 | CX2g022112 | LOC_Os02g04010 | Os02g0133000 | - | Detail |
| C1H2g27472 | 2:1,613,761-1,618,866 | + | C2H2g07026 | CX2g024675 | LOC_Os02g04020 | Os02g0133100 | OsSec14-5 | Detail |
| C1H2g25242 | 2:1,619,453-1,623,665 | - | C2H2g19264 | CX2g019449 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| C1H2g02951 | 2:1,624,793-1,634,812 | - | C2H2g26953 | CX2g024350 | LOC_Os02g04040 | Os02g0133300 | - | Detail |
| C1H2g30829 | 2:1,636,601-1,637,041 | - | C2H2g26953 | CX2g024350 | LOC_Os02g04060 | Os02g0133300 | - | Detail |
| C1H2g18206 | 2:1,638,458-1,646,512 | - | C2H2g26953 | CX2g019521 | LOC_Os02g04080 | Os02g0133400 | - | Detail |
| C1H2g21252 | 2:1,647,027-1,647,830 | - | C2H2g26953 | CX2g019521 | LOC_Os02g04090 | - | - | Detail |
| C1H2g25852 | 2:1,650,271-1,653,694 | + | C2H2g03692 | CX2g021792 | LOC_Os02g04100 | Os02g0133800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003720 | 1:11,407,280-11,409,590 | - | C1H1g04116 | - | - | - | - | Detail |
| CX1g004853 | 1:11,409,838-11,415,327 | + | C1H1g24526 | C2H1g14248 | LOC_Os01g23530 | Os01g0337100 | OsTPS1 | Detail |
| CX1g006068 | 1:11,421,598-11,427,781 | + | C1H1g15203 | C2H1g23715 | LOC_Os01g23580 | Os01g0337500 | - | Detail |
| CX1g006612 | 1:11,428,931-11,443,473 | - | C1H1g02550 | C2H1g14719 | LOC_Os01g23590 | Os01g0337600 | - | Detail |
| CX1g005196 | 1:11,446,556-11,454,430 | + | C1H1g31824 | C2H1g25789 | LOC_Os01g23610 | Os01g0337900 | OsLPD2 | Detail |
| CX1g003937 | 1:11,460,505-11,462,185 | + | C1H1g07766 | C2H1g07427 | LOC_Os01g23620 | Os01g0338000 | - | Detail |
| CX1g003576 | 1:11,465,386-11,468,193 | + | C1H1g18847 | C2H1g12886 | LOC_Os01g23630 | Os01g0338100 | - | Detail |
| CX1g002951 | 1:11,470,591-11,479,244 | + | C1H1g20446 | C2H1g27271 | LOC_Os01g23640 | Os01g0338200 | - | Detail |
| CX1g002645 | 1:11,488,711-11,492,685 | - | C1H1g02265 | C2H1g02413 | LOC_Os01g23680 | Os01g0338600 | - | Detail |
| CX1g006775 | 1:11,510,859-11,511,209 | + | - | - | LOC_Os01g23705 | Os01g0339400 | - | Detail |
| CX1g005605 | 1:11,511,782-11,514,032 | - | C1H1g28850 | C2H1g16601 | LOC_Os01g23710 | Os01g0339500 | - | Detail |
| CX1g002019 | 1:11,518,093-11,518,323 | - | C1H1g03194 | C2H1g23562 | - | - | - | Detail |
| CX1g006831 | 1:11,522,853-11,526,319 | + | C1H1g16343 | C2H1g14059 | LOC_Os01g23740 | Os01g0339900 | - | Detail |
| CX1g004413 | 1:11,534,830-11,535,309 | - | - | C2H6g27200 | - | - | - | Detail |
| CX1g004085 | 1:11,540,616-11,541,682 | - | C1H1g27277 | C2H1g20040 | LOC_Os01g28660 | Os07g0631500 | - | Detail |
| CX1g005691 | 1:11,549,307-11,549,456 | + | - | - | - | Os07g0616100 | - | Detail |
| CX1g000770 | 1:11,551,511-11,552,140 | - | - | - | - | - | - | Detail |
| CX1g001171 | 1:11,557,196-11,557,381 | - | - | - | - | - | - | Detail |
| CX1g007188 | 1:11,564,447-11,565,211 | - | C1H1g07910 | C2H1g12938 | LOC_Os01g23810 | Os01g0340600 | - | Detail |
| CX1g006027 | 1:11,576,948-11,578,528 | - | C1H1g27399 | C2H1g12938 | LOC_Os01g23850 | Os01g0341000 | - | Detail |