| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g25457 | 1:6,267,010-6,270,542 | + | C2H1g18702 | CX1g001842 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| C1H1g25274 | 1:6,271,279-6,273,273 | + | C2H1g07843 | CX1g005082 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| C1H1g23728 | 1:6,276,049-6,279,054 | + | C2H1g27903 | CX1g001031 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| C1H1g29841 | 1:6,285,241-6,286,257 | + | C2H1g07762 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g01201 | 1:6,286,367-6,286,993 | + | C2H1g29591 | CX1g005082 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g24596 | 1:6,289,912-6,291,847 | + | C2H1g07697 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g05848 | 1:6,294,568-6,296,640 | + | C2H1g22175 | CX1g005082 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g29762 | 1:6,303,881-6,307,552 | + | C2H1g18144 | CX1g005755 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| C1H1g00126 | 1:6,308,090-6,310,983 | - | C2H1g23747 | CX1g000008 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| C1H1g09783 | 1:6,314,792-6,316,924 | + | C2H1g03627 | CX1g001945 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| C1H1g01893 | 1:6,317,573-6,319,078 | - | C2H1g17734 | CX1g000835 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| C1H1g19893 | 1:6,321,348-6,324,876 | - | C2H1g24769 | CX1g004836 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| C1H1g14653 | 1:6,327,914-6,332,297 | - | C2H1g00699 | CX1g001640 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| C1H1g26396 | 1:6,340,638-6,348,492 | + | C2H1g15617 | CX1g006490 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| C1H1g13199 | 1:6,350,226-6,353,655 | - | C2H1g03922 | CX1g006720 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| C1H1g07711 | 1:6,353,950-6,354,531 | - | C2H1g15811 | - | - | - | - | Detail |
| C1H1g15790 | 1:6,353,989-6,362,163 | + | C2H1g14330 | CX1g003875 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| C1H1g29443 | 1:6,385,471-6,391,253 | + | C2H1g05009 | CX1g001622 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| C1H1g08244 | 1:6,391,697-6,393,900 | - | C2H1g10198 | CX1g003284 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| C1H1g30145 | 1:6,400,300-6,402,272 | + | C2H1g13210 | CX1g003413 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003720 | 1:11,407,280-11,409,590 | - | C1H1g04116 | - | - | - | - | Detail |
| CX1g004853 | 1:11,409,838-11,415,327 | + | C1H1g24526 | C2H1g14248 | LOC_Os01g23530 | Os01g0337100 | OsTPS1 | Detail |
| CX1g006068 | 1:11,421,598-11,427,781 | + | C1H1g15203 | C2H1g23715 | LOC_Os01g23580 | Os01g0337500 | - | Detail |
| CX1g006612 | 1:11,428,931-11,443,473 | - | C1H1g02550 | C2H1g14719 | LOC_Os01g23590 | Os01g0337600 | - | Detail |
| CX1g005196 | 1:11,446,556-11,454,430 | + | C1H1g31824 | C2H1g25789 | LOC_Os01g23610 | Os01g0337900 | OsLPD2 | Detail |
| CX1g003937 | 1:11,460,505-11,462,185 | + | C1H1g07766 | C2H1g07427 | LOC_Os01g23620 | Os01g0338000 | - | Detail |
| CX1g003576 | 1:11,465,386-11,468,193 | + | C1H1g18847 | C2H1g12886 | LOC_Os01g23630 | Os01g0338100 | - | Detail |
| CX1g002951 | 1:11,470,591-11,479,244 | + | C1H1g20446 | C2H1g27271 | LOC_Os01g23640 | Os01g0338200 | - | Detail |
| CX1g002645 | 1:11,488,711-11,492,685 | - | C1H1g02265 | C2H1g02413 | LOC_Os01g23680 | Os01g0338600 | - | Detail |
| CX1g006775 | 1:11,510,859-11,511,209 | + | - | - | LOC_Os01g23705 | Os01g0339400 | - | Detail |
| CX1g005605 | 1:11,511,782-11,514,032 | - | C1H1g28850 | C2H1g16601 | LOC_Os01g23710 | Os01g0339500 | - | Detail |
| CX1g002019 | 1:11,518,093-11,518,323 | - | C1H1g03194 | C2H1g23562 | - | - | - | Detail |
| CX1g006831 | 1:11,522,853-11,526,319 | + | C1H1g16343 | C2H1g14059 | LOC_Os01g23740 | Os01g0339900 | - | Detail |
| CX1g004413 | 1:11,534,830-11,535,309 | - | - | C2H6g27200 | - | - | - | Detail |
| CX1g004085 | 1:11,540,616-11,541,682 | - | C1H1g27277 | C2H1g20040 | LOC_Os01g28660 | Os07g0631500 | - | Detail |
| CX1g005691 | 1:11,549,307-11,549,456 | + | - | - | - | Os07g0616100 | - | Detail |
| CX1g000770 | 1:11,551,511-11,552,140 | - | - | - | - | - | - | Detail |
| CX1g001171 | 1:11,557,196-11,557,381 | - | - | - | - | - | - | Detail |
| CX1g007188 | 1:11,564,447-11,565,211 | - | C1H1g07910 | C2H1g12938 | LOC_Os01g23810 | Os01g0340600 | - | Detail |
| CX1g006027 | 1:11,576,948-11,578,528 | - | C1H1g27399 | C2H1g12938 | LOC_Os01g23850 | Os01g0341000 | - | Detail |