| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06482 | 2:29,371,707-29,373,467 | + | C1H2g24237 | CX2g020266 | LOC_Os02g52480 | Os02g0762400 | KRP1, OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI | Detail |
| C2H2g14994 | 2:29,379,968-29,380,435 | - | - | CX2g020064 | LOC_Os02g52490 | Os02g0762600 | SGL1 | Detail |
| C2H2g29446 | 2:29,385,573-29,394,313 | - | C1H2g04159 | CX2g022518 | LOC_Os02g52510 | Os02g0762800 | OsRad54 | Detail |
| C2H2g01751 | 2:29,397,002-29,397,304 | - | - | CX2g023245 | LOC_Os02g52540 | - | - | Detail |
| C2H2g11954 | 2:29,401,275-29,402,154 | + | C1H2g10187 | CX2g023141 | LOC_Os02g52550 | Os02g0763000 | OsCNR1, TGW2, OsFWL1 | Detail |
| C2H2g00538 | 2:29,415,549-29,416,080 | + | C1H2g21759 | - | - | - | - | Detail |
| C2H2g18956 | 2:29,419,129-29,422,357 | + | C1H2g09761 | CX2g024148 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| C2H2g03175 | 2:29,423,273-29,426,274 | + | C1H2g15844 | CX2g024148 | LOC_Os02g52590 | Os02g0763800 | - | Detail |
| C2H2g23310 | 2:29,426,521-29,426,997 | + | C1H2g15324 | - | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g02605 | 2:29,429,194-29,432,334 | + | C1H2g26295 | CX2g023343 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g18172 | 2:29,435,564-29,438,153 | + | C1H2g14291 | CX2g019855 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| C2H2g07475 | 2:29,442,236-29,444,534 | + | C1H2g16896 | CX2g023343 | LOC_Os02g52640 | Os02g0764400 | - | Detail |
| C2H2g26785 | 2:29,444,959-29,446,785 | - | C1H2g16728 | CX2g022219 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| C2H2g22917 | 2:29,448,988-29,449,743 | - | C1H2g23870 | CX2g021656 | LOC_Os02g52670 | Os02g0764700 | OsERF103 | Detail |
| C2H2g26543 | 2:29,462,389-29,463,967 | + | C1H2g10581 | CX2g018991 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| C2H2g29404 | 2:29,466,319-29,467,913 | - | C1H2g08973 | CX2g021489 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| C2H2g24763 | 2:29,471,454-29,472,131 | - | C1H2g26635 | CX2g019501 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| C2H2g20003 | 2:29,474,844-29,478,669 | - | C1H2g13987 | CX2g022397 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| C2H2g16702 | 2:29,485,155-29,485,984 | + | C1H2g23770 | CX2g019269 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| C2H2g14916 | 2:29,487,761-29,492,896 | - | C1H2g16420 | CX2g021391 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022474 | 2:24,626,907-24,632,496 | - | C1H2g14804 | C2H2g20194 | LOC_Os02g43906 | Os02g0656200 | - | Detail |
| CX2g024885 | 2:24,633,767-24,637,210 | + | C1H2g27732 | C2H2g16183 | LOC_Os02g43920 | Os02g0656300 | - | Detail |
| CX2g024023 | 2:24,637,429-24,637,638 | - | C1H2g14804 | C2H2g20194 | - | Os02g0656400 | - | Detail |
| CX2g020033 | 2:24,642,775-24,646,404 | + | C1H2g03674 | C2H2g03356 | LOC_Os02g43930 | Os02g0656500 | - | Detail |
| CX2g023693 | 2:24,659,922-24,660,110 | + | - | - | - | Os02g0188201 | - | Detail |
| CX2g021598 | 2:24,668,515-24,669,192 | + | C1H2g18536 | C2H2g16735 | LOC_Os02g43970 | Os02g0657000 | ARAG1, OsAP211 | Detail |
| CX2g019909 | 2:24,685,216-24,686,256 | + | - | C2H2g18352 | LOC_Os02g44000 | Os02g0657600 | - | Detail |
| CX2g019542 | 2:24,687,179-24,689,791 | - | C1H2g25776 | C2H2g24603 | LOC_Os02g44010 | Os02g0657700 | - | Detail |
| CX2g023554 | 2:24,693,866-24,694,401 | + | - | - | - | - | - | Detail |
| CX2g023520 | 2:24,701,258-24,702,397 | - | C1H2g03030 | C2H2g25514 | LOC_Os02g44040 | Os02g0658000 | - | Detail |
| CX2g020097 | 2:24,704,324-24,705,254 | - | C1H2g22002 | C2H2g13342 | LOC_Os02g44080 | Os02g0658100 | - | Detail |
| CX2g022253 | 2:24,710,111-24,710,580 | - | C1H2g22411 | C2H2g08645 | LOC_Os02g44090 | Os02g0658200 | - | Detail |
| CX2g022180 | 2:24,713,855-24,714,379 | + | C1H2g05242 | C2H2g10464 | LOC_Os02g44100 | Os02g0658300 | - | Detail |
| CX2g024807 | 2:24,718,948-24,720,032 | - | C1H2g07763 | C2H2g29171 | LOC_Os02g44102 | Os02g0658400 | - | Detail |
| CX2g024395 | 2:24,720,850-24,721,305 | - | C1H2g07763 | C2H2g29171 | LOC_Os02g44102 | Os02g0658400 | - | Detail |
| CX2g022450 | 2:24,722,125-24,725,587 | - | C1H2g07763 | C2H2g29171 | LOC_Os02g44104 | Os02g0658500 | - | Detail |
| CX2g019846 | 2:24,728,618-24,730,005 | + | C1H2g23025 | C2H2g08369 | LOC_Os02g44106 | Os02g0658600 | - | Detail |
| CX2g021187 | 2:24,738,978-24,740,230 | + | C1H2g29919 | C2H2g19921 | LOC_Os02g44108 | Os02g0658800 | - | Detail |
| CX2g021679 | 2:24,745,473-24,745,649 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g020003 | 2:24,749,363-24,752,047 | - | C1H2g30940 | C2H2g21677 | LOC_Os02g44111 | Os02g0658900 | - | Detail |